| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1174 |
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| Symbol | |
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| ID | 1219990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1234061 |
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| End bp | 1235116 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637237544 |
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| Product | transmembrane ABC transporter protein |
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| Protein accession | NP_519295 |
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| Protein GI | 17545893 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000600892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.310327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCCT ACCTGATCAA ACGCCTGCTG CTGCTGATCC CGACACTGAT CGGCGTGGTG
ACGCTCACCT TCGTGGTGAT CCAGTTCGTG CCCGGCGGGC CGGTCGAGCA GATGCTGATG
GAGATGAAGG GGCGCGGCAG CGGCATCGTC GAGGCCAGCG GCGGCGGGGG CATGGAATAC
CGCGGCCGGC GCGGCGTCGA TCCTGAGAAG ATCAAGGAGA TCCGCGCGCT GTACGGTTTC
GACAAGGGAC CGGTCGAGCG CTACTTCCTG ATGCTCGGCC GCTTCGCCCG CTTCGACCTG
GGCGAAAGCT ATTTCCAGCA CCGCAGCGTG TGGGAGCTGA TCAAGTCCAA GCTGCCGGTA
TCGATCTCGA TCGGGCTGTG GACGTTCTTC CTGACCTACC TGATATCGGT GCCGCTCGGC
ATTGCCAAGG CGGTGCGCGC GGGCAGCCGG TTCGACCTGG TGAGCAGCGT GATCGTGCTG
GTCGGCTACG CGATCCCGGG GTTCGTGCTC GGCGTGCTGC TGCTGGTGCT GTTCGGCGGC
GGCACGTTCT TCCAGTGGTT CCCGATCCGG GGGCTGACCT CCGACAACTG GGGCCAGCTC
AGCCTGCCCG GCAAGGTGAC GGACTACCTG TGGCACATCG CGCTGCCGAT CACCGCCTCG
GTCGTCGGCA GCTTCGCCGT CATCACCATG CTGACCAAGA ACGCATTCCT GGAGGAGATC
CGCAAGCAGT ACGTGCTGAC GGCCCGCAGC AAGGGCCTGT CGGAGCGGCG CGTGCTGTGG
AAGCACATCT TCCGCAACGC GATGATCCCG CTGGTGACGG GCTTTCCCGC CGCGTTCATC
GGCGCCTTCT TCACCGGCTC TCTGCTGATC GAGAAACTGT TTTCGCTCGA CGGCATGGGC
CTGATGTCTT ACGAAGCGGT GGTGCAGCGC GACTATCCGG TCGTCCTCGG GACGCTCTAT
GTCTTTACGC TGATCGGCCT GGCGACGCGG CTGATTTCCG ATGTGTGCTA CGTGCTGGTC
GATCCGCGCA TCCATTTCGG CGCGATCGGG CGGTAA
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| Protein sequence | MFAYLIKRLL LLIPTLIGVV TLTFVVIQFV PGGPVEQMLM EMKGRGSGIV EASGGGGMEY
RGRRGVDPEK IKEIRALYGF DKGPVERYFL MLGRFARFDL GESYFQHRSV WELIKSKLPV
SISIGLWTFF LTYLISVPLG IAKAVRAGSR FDLVSSVIVL VGYAIPGFVL GVLLLVLFGG
GTFFQWFPIR GLTSDNWGQL SLPGKVTDYL WHIALPITAS VVGSFAVITM LTKNAFLEEI
RKQYVLTARS KGLSERRVLW KHIFRNAMIP LVTGFPAAFI GAFFTGSLLI EKLFSLDGMG
LMSYEAVVQR DYPVVLGTLY VFTLIGLATR LISDVCYVLV DPRIHFGAIG R
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