Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1167 |
Symbol | cysS |
ID | 1219982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1224615 |
End bp | 1226012 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237536 |
Product | cysteinyl-tRNA synthetase |
Protein accession | NP_519288 |
Protein GI | 17545886 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.103302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATCAC TCAAGATCTA CAACACGCTC GCGCGTGAGA AACAGACGTT CGTCCCCATC GAGCCCGGCC GCGTGCGCAT GTACGTGTGC GGGATGACGG TGTACGACTA CTGTCACGTC GGGCATGCGC GGGTGATGGT GGTGTTCGAC ATGGTGCAGC GCTGGCTGCG CGCGTCGGGG TATGACGTGA CCTACGTGCG CAACATCACC GACATCGACG ACAAGATCAT CAAGCGCGCG GTCGAGAACG GCGAGACCAT CGGCGCGCTC ACCAACCGCT TCATCGCCGC CATGCACGAA GACGCCGACG CGCTCGGCGT GCAGCGCCCC GACCGCGAGC CGCGCGCCAC CGAATACGTG CCGCAGATGC TGTCGATGAT CGGCAGGCTG CAAGACAACG GTCTGGCCTA CCAGGCGGCC GACGGCGACG TGAACTACGC GGTGCGCAAG TTCCCGGGCT ACGGCAAGCT GTCGGGCAAG TCCCTCGAAG ACCTGCGCGC CGGAGAACGC GTGGCCGCCA ACGATGCCAA GCAGGATCCG CTGGACTTCG TGCTGTGGAA ATCCGCCAAG GCCGACGAGC CGGCCGAGAG TCGCTGGGCC TCGCCGTGGG GCGAGGGCCG TCCGGGCTGG CACATCGAGT GCTCGGCGAT GAGCTGCGAC CTGCTCGGCA CGCATTTCGA CCTGCACGGC GGCGGCGCCG ACCTGCAGTT CCCGCACCAC GAAAACGAGA TCGCCCAGTC CGAGGGCGCC AGCGGCAGCA CCTTCGTCAA CACCTGGATG CACAACGGCT TCGTGCGCGT GAACGACGAG AAGATGTCGA AGTCGCTCGG CAACTTCTTC ACCATCCGTG ACGTGCTCAA GGTGTACGAC CCGGAAGTCG TGCGCTTCTT CATCCTGCGC TCGCACTACC GCAGCGACCT GAACTACAGC GATGTGCACC TGGACGATGC GCGCCACGCG CTGACGCGCC TGTACACCGC GCTCAAGGAC GTGCCCGCCG AGGCGCAGGC CCGGCCCGAC TGGAACGAGC CCCATGGCAA GCGTTTCCGC GAGGCGATGC ACGACGACTT CAACACGCCC GTCGCCATGG CCGTGCTGTT CGAGCTGGCG ACCGAAGTCA ACAAGACGCG CTCACCGGCG CTGGCCAGCC AGCTGGCGGC GCTGGGCGGC GTGATGGGCC TGCTGGTCCG CGATCCGCAT GCCTTCCTGC AGGGCGGCGT CGGCGCGGCC GCCGATGGTC TGGATGCCGC CGAGGTGGAG GCGCGCATCG AAGCCCGCCG CGCCGCCAAG GCCGCGCGTG ATTTCGCACG CGCCGACGGC ATCCGCGCCG ATCTGCTGGC GGCCGGCATC GTGCTCGAAG ACAAGCCGGG CGGCGTGACC GAATGGAGAC GCGCATGA
|
Protein sequence | MESLKIYNTL AREKQTFVPI EPGRVRMYVC GMTVYDYCHV GHARVMVVFD MVQRWLRASG YDVTYVRNIT DIDDKIIKRA VENGETIGAL TNRFIAAMHE DADALGVQRP DREPRATEYV PQMLSMIGRL QDNGLAYQAA DGDVNYAVRK FPGYGKLSGK SLEDLRAGER VAANDAKQDP LDFVLWKSAK ADEPAESRWA SPWGEGRPGW HIECSAMSCD LLGTHFDLHG GGADLQFPHH ENEIAQSEGA SGSTFVNTWM HNGFVRVNDE KMSKSLGNFF TIRDVLKVYD PEVVRFFILR SHYRSDLNYS DVHLDDARHA LTRLYTALKD VPAEAQARPD WNEPHGKRFR EAMHDDFNTP VAMAVLFELA TEVNKTRSPA LASQLAALGG VMGLLVRDPH AFLQGGVGAA ADGLDAAEVE ARIEARRAAK AARDFARADG IRADLLAAGI VLEDKPGGVT EWRRA
|
| |