Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1164 |
Symbol | ppiB |
ID | 1219979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1222542 |
End bp | 1223081 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637237533 |
Product | peptidyl-prolyl cis-trans isomerase B |
Protein accession | NP_519285 |
Protein GI | 17545883 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.521949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.617391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTTTGC GCTTTTCCGC CAAGGAACTC ACCATGACCC AAGTCAAGCT GCACACCAAC CACGGCGACA TCACGCTGGC CCTGGACGCC GAGAAGGCGC CCAAGAGCGT CGCCAACTTC GTCCACTACG TCAAGAAGGG CCACTACAAC GGCACGGTGT TCCACCGCGT CATCAAGGGC TTCATGATCC AGGGCGGCGG TTTCGAGCCG GGCGCCGACA TGAAGCAGAA GCCGACCGAC GCACCGATCG ACAACGAAGC CAACAACGGC CTGAAGAACG AGCGCGGCTC GATCGCCATG GCGCGCACCA ACGACCCGCA TTCGGCCACG GCCCAGTTCT TCATCAACGT GGTCGACAAC GACTTCCTGA ACCACACCTC GCCGACGCCG CAAGGCTGGG GCTATGCCGT GTTCGGCAAG GTGACCGAGG GCCTGGACGT GGTCGACAAG ATCCGCGCCG TGCGCACCGG CAACCGCGGC TACCACCAGG ACGTGCCGAT GGAAGACGTG GTGATCGAAA GCGCCGAAGT GATCGAATGA
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Protein sequence | MLLRFSAKEL TMTQVKLHTN HGDITLALDA EKAPKSVANF VHYVKKGHYN GTVFHRVIKG FMIQGGGFEP GADMKQKPTD APIDNEANNG LKNERGSIAM ARTNDPHSAT AQFFINVVDN DFLNHTSPTP QGWGYAVFGK VTEGLDVVDK IRAVRTGNRG YHQDVPMEDV VIESAEVIE
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