| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1157 |
|---|
| Symbol | |
|---|
| ID | 1219972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 1216908 |
|---|
| End bp | 1217633 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637237526 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519278 |
|---|
| Protein GI | 17545876 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.192207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTGC CCGCCCCCAT CCGCATCGAT GCCCTCCTGA CCGGCCGGGC CGTCGACTAC
ACCCGCCCCG GCTCGCGCAG CGCCATCGAC AAGCGGCCGG TAGCCGATGC GGTGCAGATC
GGCCCCGACG GCATCGTCGG CGACGAGCAA GGCGACCTGC GCGTGCACGG CGGGCCCGAC
AAGGCGATCC ACCACTACCC GTTCGACCAC TACCCGGCCT GGCAGACCGA CCTCGGTGCG
CACCCGCTGC TGGCCCGGCC CGGCGCGTTC GGCGAGAACA TCAGCACGCG GGGCCTCACC
GAAGCCGATC TCTGCGTCGG CGACCGGCTG CGCGCGGGCG AGGTGGTGCT GGAGGTTTCG
CAGCTGCGCC AGCCGTGCTG GAAGCTCAAC GACCGCTTCG CACAGCGCGA CATGGCCCGT
CGCGTGCAGC AGAGCGGCCG CACGGGCTGG TACTACCGGG TGCTGCAAGG CGGCACGCTG
CGCGCGGGCG ACACACTCGC CTGGCTGGAA CGCCCGTGGC CGCAATGGCC GCTGGCGCGT
GTGCTGGACG TGCTCTACCG GAACATGCTG GACACGGACG CGCTCGGCGA CATGCTGGCG
CTGCCGCTGA CACCGTCGTG GCGCAAGCTG GTGGAGAACC GGCTGGCACG CGGCGAGGTG
GAAAGCTGGG ACAAGCGGAT CGAAGGCCCG GCGCGCGAGC CCTCGGGCCG CGCGCCGCAG
GCCTGA
|
|---|
| Protein sequence | MMLPAPIRID ALLTGRAVDY TRPGSRSAID KRPVADAVQI GPDGIVGDEQ GDLRVHGGPD
KAIHHYPFDH YPAWQTDLGA HPLLARPGAF GENISTRGLT EADLCVGDRL RAGEVVLEVS
QLRQPCWKLN DRFAQRDMAR RVQQSGRTGW YYRVLQGGTL RAGDTLAWLE RPWPQWPLAR
VLDVLYRNML DTDALGDMLA LPLTPSWRKL VENRLARGEV ESWDKRIEGP AREPSGRAPQ
A
|
|---|
| |