Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1143 |
Symbol | trpS |
ID | 1219958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1198850 |
End bp | 1200052 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237512 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | NP_519264 |
Protein GI | 17545862 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.422783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCTG AACGCGTTCT TTCCGGCATG CGGCCGACCG GTGCCTTGCA CCTGGGTCAC TACCACGGCG TCCTGAAAAA CTGGGTCCGG CTGCAGGCCG AATACCCATG CTTTTTCTTC GTCGCCGACT GGCATGCGCT GACCACGCAC TACGAATCGC CCGAGGTGAT CGAGGAATCG GTGTGGGAGA TGCTGATCGA CTGGCTGGCC GCCGGCGTCG ATCCGACCCA GGCCACGCTG TTCATCCAGA GCCGCGTACC CGAGCATGCC GAGCTGTTCC TGCTGCTGTC GATGGGCACG CCGCTGGGCT GGCTCGAGCG CGTGCCGACC TACAAGGACC AGATCGAGAA GCTCAAGGAA AAGGACTTGT CCACCTACGG CTTCCTCGGC TATCCGCTGC TGCAGGCCGC CGACATCCTG ATCTACCGCG CCGGCTTCGT GCCGGTGGGC GAAGACCAGG TGCCGCACGT CGAGATGACG CGCGAGGTGG CGCGCCGCTT CAACTACCTG TACGGCCGCG AGCCGGGCTT CGAGCAGAAG GCGCTGGATG CGGCCAAGAA GCTCGGCGGC AAGCGCGCCA AGCTCTATCT GGAGCTGCGC ACGGCCCACC AGGAGCGCGG CGAGGACGAT GCCCTGGAGC AGGCCCGCGC ATTGCTGGCC GAATCGCAGA GCCTGTCGAT GGGCGACCGC GAGCGCCTGT TCGGCTACCT GGAAGGCGCG CGCAAGATCA TCCTGCCGGA GCCGCAGGTG CTGCTGACCG AGGCGTCGCG CATGCCGGGC CTGGACGGGC AGAAGATGTC CAAGTCCTAC GGCAACACCA TCCGCATGCG CGAGGACAAG GCCAGCGTCG AGAAAAAGGT ACGCACCATG CCGACCGATC CGGCCCGCGT GCGTCGCACC GATCCGGGCG ATCCGGGAAA GTGCCCGGTC TGGCAGCTGC ACCAGGTGTA CTCCGATGCG GATACCAGGG AATGGGTGCA GAAGGGATGC CGCAGTGCCG GCATCGGCTG CCTGGAATGC AAGCAGCCCG TCATCGACGG CATCTTGCGC GAGCAGCAGC CGATGCTGGA GCGCGCGCAG AAGTACATGG ACGACCCGTC GCTGCTGCGC GCCATCATCG CCGACGGCTG CGATACCGCA CACAAGGTCA CGCAGGAGAC CATGCGCGAG GTGCGCGAGG CGATGGGGCT GACGTACAGC TGA
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Protein sequence | MFPERVLSGM RPTGALHLGH YHGVLKNWVR LQAEYPCFFF VADWHALTTH YESPEVIEES VWEMLIDWLA AGVDPTQATL FIQSRVPEHA ELFLLLSMGT PLGWLERVPT YKDQIEKLKE KDLSTYGFLG YPLLQAADIL IYRAGFVPVG EDQVPHVEMT REVARRFNYL YGREPGFEQK ALDAAKKLGG KRAKLYLELR TAHQERGEDD ALEQARALLA ESQSLSMGDR ERLFGYLEGA RKIILPEPQV LLTEASRMPG LDGQKMSKSY GNTIRMREDK ASVEKKVRTM PTDPARVRRT DPGDPGKCPV WQLHQVYSDA DTREWVQKGC RSAGIGCLEC KQPVIDGILR EQQPMLERAQ KYMDDPSLLR AIIADGCDTA HKVTQETMRE VREAMGLTYS
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