| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1141 |
|---|
| Symbol | |
|---|
| ID | 1219956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1197478 |
|---|
| End bp | 1198101 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637237510 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519262 |
|---|
| Protein GI | 17545860 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGT TCTTCCAGAT CCATCCGACC ACGCCGCAGG GGCGGCTGAT CCGCCAGGCG
GTGGAAATCA TCCGCGCCGG CGGCCTGATC GCGCTGCCGA CCGACTCCTG CTACGCGCTG
GCCTGCCACC TGGATGACAA GGCCGCCGTG GAGCGCTTGC GCCGCGTGCG CGGCATCGAC
GAAAAGCACC ACCTGACGCT GATGTGCCGG GACCTGTCGG AGCTGGCCAC CTTCGCCCGC
GTCGACAACC GGCAGTATCG CGCGGTCAAG GCGGCCACGC CCGGCCCGTT CGTCTTCCTG
CTGGAGGCGA CCCGGGAGGT GCCGCGCCGG CTGTCGCATC CGTCGCGCAA GACCATCGGC
CTGCGCGTGC CCGACCACCC GATCCCGCTG GCGCTGATGG CCGAGCTGGG CGAGCCGCTG
CTGTCCGCCA CGCTGCAGCT GCCGGGCGAC GAAGCGCCGC TCAACGAAGC GGATGCCATC
CGCGCCCTGC TGGAGCGGCA ACTGGAGCTG GTGATCGACG GCGGCCCGGC CCCGGCAGAG
CCCACCACCG TGATCGACCT GACCGGCGGC GAGCCGGAAC TGGTGCGCAG GGGGCGCGGC
GACCCGGCCA GGGTCGGCCT GTAG
|
|---|
| Protein sequence | MSQFFQIHPT TPQGRLIRQA VEIIRAGGLI ALPTDSCYAL ACHLDDKAAV ERLRRVRGID
EKHHLTLMCR DLSELATFAR VDNRQYRAVK AATPGPFVFL LEATREVPRR LSHPSRKTIG
LRVPDHPIPL ALMAELGEPL LSATLQLPGD EAPLNEADAI RALLERQLEL VIDGGPAPAE
PTTVIDLTGG EPELVRRGRG DPARVGL
|
|---|
| |