Gene RSc1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1140 
Symbol 
ID1219955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1196595 
End bp1197455 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content72% 
IMG OID637237509 
Producthypothetical protein 
Protein accessionNP_519261 
Protein GI17545859 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAC GCTCCGCTTC CGCTCCCATC AACGCCGACC TGCACTGCCA CTCCACGGTG 
TCGGACGGCC TGCTCGCACC CCGTGAAGTC GCCGCCCGCG CCGCCGCCCA TGGCGTGACG
CTGTGGGCGC TGACCGACCA CGACGAGGTC GGCGGCCAGG CCGCCGCGCG CGAGGCGGCC
GAATCGCTCG GCATGGACTA CCTGGCGGGC GTGGAAATCT CCGTCACGTG GGCCGGCCGC
ACGCTGCATA TCGTCGGCCT CGGCATCGAT CCGGACGATG CGGCCCTGGT GCAGGGCCTG
GCGCGCACCC GCTCGGGCCG CTGCGCGCGC GCCGAAGACA TGGCCGAGGC CCTGGGCAAG
CTGGGCATCC ACGGTGCCTA CGAGGGCGCG CTGTCATACG CCGGCAACCC GGACATGATC
TCGCGCACGC ATTTCGCGCG CTTCCTGGTC GAGCACGGCC ATTGCCGCGA CATCGCCGAG
GTGTTCGACC GCTACCTGGG CGAGGGCAAG CCCGGCTTCG TGCCGCACCG GTGGTCCCGC
CTGGCCGACG CCATCGGCTG GATCCGGGGC GCCGGCGGCG TCGCGGTGAT GGCGCATCCG
GGCCGCTACA CGCTGACGCT GCTCGAGCAC GGTGCGCTGT TCGACGAGTT CAAGGATCTC
GGCGGCGAGG GCGTCGAGGT CGTCACCGGC AGCCACACGC CCGACCAGTA CGCCTGCTAT
GCCGATGTGG CGCGCCGCTA CGGCCTGCTG GCCTCGCGCG GATCGGACTT CCACGGCCCC
GGCGAGGGCC GGGTCGAGCT GGGCGAGCTG CCGCCGCTGC CGGACAACCT GACGCCGGTG
TGGAGCCGGT GGCTGTCCTG A
 
Protein sequence
MLKRSASAPI NADLHCHSTV SDGLLAPREV AARAAAHGVT LWALTDHDEV GGQAAAREAA 
ESLGMDYLAG VEISVTWAGR TLHIVGLGID PDDAALVQGL ARTRSGRCAR AEDMAEALGK
LGIHGAYEGA LSYAGNPDMI SRTHFARFLV EHGHCRDIAE VFDRYLGEGK PGFVPHRWSR
LADAIGWIRG AGGVAVMAHP GRYTLTLLEH GALFDEFKDL GGEGVEVVTG SHTPDQYACY
ADVARRYGLL ASRGSDFHGP GEGRVELGEL PPLPDNLTPV WSRWLS