Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1139 |
Symbol | |
ID | 1219954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1195355 |
End bp | 1196494 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237508 |
Product | thioredoxin reductase oxidoreductase protein |
Protein accession | NP_519260 |
Protein GI | 17545858 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGCG CGGCGCGCTA TAGTGCCCCC ATTGTTTCGT TTCGTTCCCT TCGCCTTGCC ATGACCGCCG AGACCGCCTT TTCCGCCGCC CCCCTCCCGC CCGTCGAACA GCGCATCGAC GTGCTGATCG TGGGCGCCGG GCCGGTCGGC CTGTTCGCGG CGTTCGAGGC CGGCGTGCTC GGGCTGTCGT GCGTGCTGGT GGATGTGCTG GATCGCCCCG GCGGCCAATG CACCGAGCTC TACCCGGAAA AGCCGATCTA CGACATCCCG GCGCTGGTGT CCTGCACGGC ACAGGAATTG GTGGACCGGC TGCTGGCGCA GTGCGCGCCG TTCGGCTACC CGATCCTGTG CGGCCGCCGC GCCGAGACCG TCGAGACGAT CGAAGGCGAG CACGGCCGGC GCTTCCGCGT CACCACCAGC GTTGGCGACG TGTTCGACTG CGCTGCCGTG CTGATCACCG CCGGCAACGG TGCCTTCGCG CCCCAGCGCG TCGCGCTGCC CGAGGCCGCG GCGCTGGAAG GCCGCCACCT GCACTACGCG GTGCGCGATA CCGCGCGCTT CGCAGGCAAG CACGTGGTGG TGGCCGGCGG CGGCGATTCG GCGCTGGACT GGGCGCTGGC ATTGCGCAAG ACCGCCGCGC GCGTGACGCT GGTGCACCGG CGCGAGGGCT TCCGCGCGGC CGACGCGTCG GTCGCCGGGA TGCGCGCCGC CGTGGCCGCC GGCGAGATGG ACTTCCAGGT CGGCATGATC GGCCGGCTGG ACAGCGCGCC CGACGGCACC CTCACCGGCA TCGCCCTGCG CCAGCGCGAA GGCGAGACCC GGCTCCCGTG CGATGAGCTG ATCGCGCTCT ATGGCCTGGT CTCCGAGCCC GGCCCGATCG CCAGTTGGGA CGTCGAGATG CGCGCCGGGC GCATCGTGGT CGAGACCACG GCCTACGAAA CCTCGCGCGC GGGCGTGTTC GCCGCCGGCG ACATCGCGCT GTATCCGAAC AAGCAGAAGC TGATCCTGTC GGGCTTCCAC GAGGTGGCAA TGGCGCTGCG GCGCGCCTAT CGCTATGCCA ATCCCGACAA GACACTGGTG CACACGCACA CCAGCAACGA CACGAACCTG CAGTCCAGGC TGCACGCGGC GGCGGAGTAA
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Protein sequence | MGGAARYSAP IVSFRSLRLA MTAETAFSAA PLPPVEQRID VLIVGAGPVG LFAAFEAGVL GLSCVLVDVL DRPGGQCTEL YPEKPIYDIP ALVSCTAQEL VDRLLAQCAP FGYPILCGRR AETVETIEGE HGRRFRVTTS VGDVFDCAAV LITAGNGAFA PQRVALPEAA ALEGRHLHYA VRDTARFAGK HVVVAGGGDS ALDWALALRK TAARVTLVHR REGFRAADAS VAGMRAAVAA GEMDFQVGMI GRLDSAPDGT LTGIALRQRE GETRLPCDEL IALYGLVSEP GPIASWDVEM RAGRIVVETT AYETSRAGVF AAGDIALYPN KQKLILSGFH EVAMALRRAY RYANPDKTLV HTHTSNDTNL QSRLHAAAE
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