Gene RSc1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1139 
Symbol 
ID1219954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1195355 
End bp1196494 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content71% 
IMG OID637237508 
Productthioredoxin reductase oxidoreductase protein 
Protein accessionNP_519260 
Protein GI17545858 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCG CGGCGCGCTA TAGTGCCCCC ATTGTTTCGT TTCGTTCCCT TCGCCTTGCC 
ATGACCGCCG AGACCGCCTT TTCCGCCGCC CCCCTCCCGC CCGTCGAACA GCGCATCGAC
GTGCTGATCG TGGGCGCCGG GCCGGTCGGC CTGTTCGCGG CGTTCGAGGC CGGCGTGCTC
GGGCTGTCGT GCGTGCTGGT GGATGTGCTG GATCGCCCCG GCGGCCAATG CACCGAGCTC
TACCCGGAAA AGCCGATCTA CGACATCCCG GCGCTGGTGT CCTGCACGGC ACAGGAATTG
GTGGACCGGC TGCTGGCGCA GTGCGCGCCG TTCGGCTACC CGATCCTGTG CGGCCGCCGC
GCCGAGACCG TCGAGACGAT CGAAGGCGAG CACGGCCGGC GCTTCCGCGT CACCACCAGC
GTTGGCGACG TGTTCGACTG CGCTGCCGTG CTGATCACCG CCGGCAACGG TGCCTTCGCG
CCCCAGCGCG TCGCGCTGCC CGAGGCCGCG GCGCTGGAAG GCCGCCACCT GCACTACGCG
GTGCGCGATA CCGCGCGCTT CGCAGGCAAG CACGTGGTGG TGGCCGGCGG CGGCGATTCG
GCGCTGGACT GGGCGCTGGC ATTGCGCAAG ACCGCCGCGC GCGTGACGCT GGTGCACCGG
CGCGAGGGCT TCCGCGCGGC CGACGCGTCG GTCGCCGGGA TGCGCGCCGC CGTGGCCGCC
GGCGAGATGG ACTTCCAGGT CGGCATGATC GGCCGGCTGG ACAGCGCGCC CGACGGCACC
CTCACCGGCA TCGCCCTGCG CCAGCGCGAA GGCGAGACCC GGCTCCCGTG CGATGAGCTG
ATCGCGCTCT ATGGCCTGGT CTCCGAGCCC GGCCCGATCG CCAGTTGGGA CGTCGAGATG
CGCGCCGGGC GCATCGTGGT CGAGACCACG GCCTACGAAA CCTCGCGCGC GGGCGTGTTC
GCCGCCGGCG ACATCGCGCT GTATCCGAAC AAGCAGAAGC TGATCCTGTC GGGCTTCCAC
GAGGTGGCAA TGGCGCTGCG GCGCGCCTAT CGCTATGCCA ATCCCGACAA GACACTGGTG
CACACGCACA CCAGCAACGA CACGAACCTG CAGTCCAGGC TGCACGCGGC GGCGGAGTAA
 
Protein sequence
MGGAARYSAP IVSFRSLRLA MTAETAFSAA PLPPVEQRID VLIVGAGPVG LFAAFEAGVL 
GLSCVLVDVL DRPGGQCTEL YPEKPIYDIP ALVSCTAQEL VDRLLAQCAP FGYPILCGRR
AETVETIEGE HGRRFRVTTS VGDVFDCAAV LITAGNGAFA PQRVALPEAA ALEGRHLHYA
VRDTARFAGK HVVVAGGGDS ALDWALALRK TAARVTLVHR REGFRAADAS VAGMRAAVAA
GEMDFQVGMI GRLDSAPDGT LTGIALRQRE GETRLPCDEL IALYGLVSEP GPIASWDVEM
RAGRIVVETT AYETSRAGVF AAGDIALYPN KQKLILSGFH EVAMALRRAY RYANPDKTLV
HTHTSNDTNL QSRLHAAAE