| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1138 |
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| Symbol | |
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| ID | 1219953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1194222 |
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| End bp | 1195349 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637237507 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_519259 |
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| Protein GI | 17545857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.972053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGT ACAGCGAACC CGGCAAGCAC GTCGTGGTGA TCGGCGGCTA TGGCTTTTTC
GGCGAGCGGC TGGTCAGGCG CCTGGCTGCA CACGGGGCGC TCACGATCAC GGTGGCGGGC
CGCTCCCTGG ACCGGGCGAC GGCGCTGGTC GAAACGCTGC GGCCGACCGC CCGCGCCCGG
CTGCACGCCG CGGCGCTGGA CATCAGCACC GATACGCTGC CCCGGCAGCT GCGCGCGCTG
GCGCCCGACA TGCTGATTCA CGCCAGCGGC CCCTTCCAGG GGCAGGACTA TCGCGTCGCG
CAAGCCTGCA TCGCTGCGGG CGTGCACTAC ATCGACCTCG CGGACGGACG CGCTTTCGTC
CAGGACATCT CAACGCTGGA CGCGGCGGCC AGGCAAGCAG GCGTGCTGGT CGTCAGCGGC
GCCAGCTCGG TGCCGGCGCT GTCCGGCGCG GCGGCGGATC ACCTGGCACA GGGCCTCGCC
GCGGTGGATG CGATCGACAT CGGCATCAGC CCGGGCAACC GGACGGAGCG CGGCTTGTCG
ACCGTGCAGG CGATCCTGAG CTATTGCGGC AAGCCGCTGC CCTCCCCGCG AGAACCGGTG
TTCGGCTGGC GCGGCACCTG GCGGCACCGC TACCCCACGC CCGTCGGCGA GCGGCTGATG
TCGCCTTGCG ATGTGCCGGA CCTGACGCTG TTTCCGGCGC GCTACCCCGG CACCCCGCGC
GTGCGCTTCG GCGCGGGGCT CGAGCTACGC CTGCTGCATC GGGGGATGAA TCTGATGGCG
GCGCTGGCGC AGGCCGGCCT CGTGCGGGAC TGGTCGCGCC ACGCGCGCTG GCTCAAAGCG
GTATCGGAGT GGCTCCTGCC CTACGGATCG GACGCCGGCG CCATGCACGT CCGCGTCGAG
GGGCGCGATG GCGGCCACCA GGCGCGGGCC CGCGCATGGC ACCTGGTGGC CGCGCGCGGC
GACGGCCCGT ACGTGCCGAC GCTGGCCGCT GCCGCGCTAG TGCGCCGCTT TCTCGAAGGC
ACGCTGCCGC AGCGCGGCGC ACGGCCGTGC ATCGGCCTGC TGACCCTGGC GGATTTCGCG
CGCGAAACCG AGGGCCTCGC CATCACCATG CAGGACACGC CTGCATGA
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| Protein sequence | MPAYSEPGKH VVVIGGYGFF GERLVRRLAA HGALTITVAG RSLDRATALV ETLRPTARAR
LHAAALDIST DTLPRQLRAL APDMLIHASG PFQGQDYRVA QACIAAGVHY IDLADGRAFV
QDISTLDAAA RQAGVLVVSG ASSVPALSGA AADHLAQGLA AVDAIDIGIS PGNRTERGLS
TVQAILSYCG KPLPSPREPV FGWRGTWRHR YPTPVGERLM SPCDVPDLTL FPARYPGTPR
VRFGAGLELR LLHRGMNLMA ALAQAGLVRD WSRHARWLKA VSEWLLPYGS DAGAMHVRVE
GRDGGHQARA RAWHLVAARG DGPYVPTLAA AALVRRFLEG TLPQRGARPC IGLLTLADFA
RETEGLAITM QDTPA
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