| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1127 |
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| Symbol | kdsA |
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| ID | 1219942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1186245 |
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| End bp | 1187099 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237496 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | NP_519248 |
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| Protein GI | 17545846 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.265022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT GCGATTTCGA GATCGGCCTC GACCGTCCGT TCTTCCTGAT TGCCGGCACC
TGCGTGATCG AGTCCGAGCA GATGGCGATC GACACCGCCG GTACGCTCAA GGAGATCACC
GGCGCGCTGG GCATTCCGTT CATCTACAAG TCGTCGTTCG ACAAGGCGAA CCGCTCGTCG
GATGCGTCGT TCCGCGGCCT CGGTATGGAA GAGGGCTTGC GCATCCTGGC GGAAGTCCGC
CGCCAGGTGG GGGTGCCGGT GCTGACCGAC ATCCACGAGA TCGACGAGAT CAAGCCGGTG
GCCAGCGTTG TGGACGTGCT GCAGACGCCG GCCTTCCTGT GCCGCCAGAC CGATTTCATC
CGCGCCTGCG CGCAGAGCGG CAAGCCCGTC AACATCAAGA AGGGCCAGTT CCTCGCGCCG
CACGACATGA AGAACGTCAT CGACAAGGCG CGCCACGCCG CCCGCGATGC CGGCCTGCCC
GAAGACAGCT TCATGGCCTG TGAACGCGGC GCTTCGTTCG GCTACAACAA CCTGGTGTCG
GACATGCGCT CGCTGGCGAT CATGCGCGAG ACCGGCGCGC CGGTGGTGTT CGATGCCACA
CACTCGGTGC AGCTGCCGGG CGGCCAGGGC ACCAGCTCGG GCGGCCAGCG CGAGTTCGTG
CCGGTGCTGG CCCGCGCCGC CGTGGCCACC GGCGTGGCCG GCGTCTTCAT GGAAACGCAC
CCCGATCCCG CCTGCGCGAA ATCGGACGGT CCGAATGCCG TGCCGCTGCG CCGCATGAAA
GACTTGCTGT CGGTGCTCAA GGAACTGGAC ACGCTGACCA AGCGCAACGG CTTCCTCGAA
AACCAGTTCG ACTGA
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| Protein sequence | MKLCDFEIGL DRPFFLIAGT CVIESEQMAI DTAGTLKEIT GALGIPFIYK SSFDKANRSS
DASFRGLGME EGLRILAEVR RQVGVPVLTD IHEIDEIKPV ASVVDVLQTP AFLCRQTDFI
RACAQSGKPV NIKKGQFLAP HDMKNVIDKA RHAARDAGLP EDSFMACERG ASFGYNNLVS
DMRSLAIMRE TGAPVVFDAT HSVQLPGGQG TSSGGQREFV PVLARAAVAT GVAGVFMETH
PDPACAKSDG PNAVPLRRMK DLLSVLKELD TLTKRNGFLE NQFD
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