Gene RSc1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1126 
SymbolpyrG 
ID1219941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1184558 
End bp1186222 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content65% 
IMG OID637237495 
ProductCTP synthetase 
Protein accessionNP_519247 
Protein GI17545845 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.116547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGT TCGTATTCGT CACCGGTGGC GTTGTGTCCT CGCTCGGCAA GGGCATCGCC 
GCCGCCTCGC TCGCGGCCAT CCTTGAGTCG CGCGGCCTCA AAGTCACCCT CCTCAAACTC
GATCCCTACA TCAACGTCGA CCCGGGCACG ATGAGCCCGT TCCAGCACGG CGAGGTGTTC
GTGACGGAGG ACGGTGCAGA AACCGACCTC GATCTTGGCC ACTACGAGCG CTTCGTCTCG
GCCAAGATGC GCAAGGCCAA CAACTTCACC ACCGGCCAGA TCTACGAATC CGTGATCCGC
AAGGAGCGTC GCGGCGAGTA TCTCGGCAAG ACGGTGCAGG TCATTCCGCA CATCACCAAC
GAGATCCAGG CCTTCATCGA GCGTGGCGCC AAGGCCTCGC ACGATGGCAA GGCAGACGTG
GCGATCGTCG AGATCGGCGG CACGGTGGGC GACATCGAGT CGCTGCCGTT CCTGGAAGCC
GCGCGGCAGA TGAGCCTGCG CCTGGGCCGC AACCAGGCGG CGTTCGTGCA TCTGACGCTG
GTGCCGTTCA TCGCCAGCGC CGGCGAGCTC AAGACCAAGC CGACCCAGCA CTCGGTGCAG
AAGCTGCGCG AGATCGGCGT CCAGCCGACC GCGCTGCTGT GCCGCGCCGA CCGCCCCATC
CCCGATGACG AGCGCGCGAA GATCTCGCTG TTCGCCAACA TGCCGCAGGA CGCGGTGATC
TCGGTGTGGG ACGTCGACAC CATCTACAAG ATCCCGCAGA TGCTCAACGA GCAGGGCCTC
GACCGCATCA TCTGCGAGGA GCTGCGCATC GATGCACCGC CGGCCGACCT GTCCATGTGG
TCGCGCATGG TGCACACGCT GGAGAACCCG CAGCACGAGA TCACCATCGG CATGGTCGGC
AAGTATGTCG ACCTGACCGA GTCGTACAAG TCGCTGATCG AGGCGCTGCG CCATGCCGGG
CTGCACACCT CGACGCGCGT CAACATCGAG TACATCGATT CCGAAGAGCT GGAGTCGGGC
CATACGCAGG TGCTGGAATC GCTCGACGCG ATCCTGGTGC CGGGCGGCTT CGGCAAGCGC
GGCACGGAAG GCAAGATCCG CGCGATCCAG TACGCCCGCG AGAAGACTGT GCCGTACCTG
GGCATCTGCC TGGGGATGCA GCTGGCCGTC ATCGAGTTCG CCCGCCACGT GGCCGGCATG
CAGGACGCCA ACAGCACGGA ATTCAACCTC GAGACCGAGC ATCCGGTGGT GGCGCTGATC
ACCGAATGGC AGGATCGCGA CGGCCGCGTT GAAAAACGCT CGGCCGACTC CGACCTGGGC
GGCACCATGC GCCTGGGCGC GCAGCGCGTG CCGGTCCAGA CCGGCACCAA GGCGTCGCAG
ATCTATGGTG CTGAGGTCAA CGAGCGCCAC CGTCATCGCT ACGAAGTGAA CAACCACTAC
GTGCCGCAGC TGGAGAAGTC CGGGATGATC ATCTCGGCGC GCACGCCGTC GGAAAACCTG
CCGGAAATGA TGGAGCTGCC GGGCGCGATG CACCCGTGGT TCGTCGGCGT GCAGTTCCAC
CCGGAATTCA CCTCGACACC GCGCGACGGC CACCCGCTGT TCAAGGCCTA TGTGGAAGCC
GCGCTGGCGC ATCGCCAGCG CCAGGCACAA CGCGCGGTCG CCTGA
 
Protein sequence
MTKFVFVTGG VVSSLGKGIA AASLAAILES RGLKVTLLKL DPYINVDPGT MSPFQHGEVF 
VTEDGAETDL DLGHYERFVS AKMRKANNFT TGQIYESVIR KERRGEYLGK TVQVIPHITN
EIQAFIERGA KASHDGKADV AIVEIGGTVG DIESLPFLEA ARQMSLRLGR NQAAFVHLTL
VPFIASAGEL KTKPTQHSVQ KLREIGVQPT ALLCRADRPI PDDERAKISL FANMPQDAVI
SVWDVDTIYK IPQMLNEQGL DRIICEELRI DAPPADLSMW SRMVHTLENP QHEITIGMVG
KYVDLTESYK SLIEALRHAG LHTSTRVNIE YIDSEELESG HTQVLESLDA ILVPGGFGKR
GTEGKIRAIQ YAREKTVPYL GICLGMQLAV IEFARHVAGM QDANSTEFNL ETEHPVVALI
TEWQDRDGRV EKRSADSDLG GTMRLGAQRV PVQTGTKASQ IYGAEVNERH RHRYEVNNHY
VPQLEKSGMI ISARTPSENL PEMMELPGAM HPWFVGVQFH PEFTSTPRDG HPLFKAYVEA
ALAHRQRQAQ RAVA