Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1124 |
Symbol | |
ID | 1219939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1182717 |
End bp | 1183631 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237493 |
Product | hypothetical protein |
Protein accession | NP_519245 |
Protein GI | 17545843 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3484] Predicted proteasome-type protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.539621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.236863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTACT GCGTCGCCAT GCGCCTGGAC GCTGGCCTGG TCTTCCTGTC GGATTCCCGC ACCAACGCGG GCGTCGACGC CATCTCCACC TTCCGCAAGA TGACCGTCTT CGAGCGCGAA GGCGACCGCG TGATGGTGCT GCTGACCGCC GGCAATCTCG CCATCAGCCA GGCCGTGCGG CAGGTGCTGA CCGAGGCGCG CGACAAGGCG CGCTCGCTGT GGACGGCGCG GGACATGTTC GAGGCCACCA CCATCGTCGG CGAGGCGGTG CGCGAGGTGT ACGACCGCGA TGCCGCGGCG CTGGCCAAGG CCAAGATCGA CTTCAACGTC AGCATCATCT TCGGCGGGCA GATCGGCGGC GAGCGGCCGC GCCTGTTCAA CGTCTACGCC GCCGGCAATT TCATCGAAGC CACGCCCGAG AACTGCTACT TCCAGATCGG CGAGGCCAAG TACGGCAAGC CCATCATCGA TCGCCTGATC CGTGCGTCGC TGCCGCTGGA CGAAGCCGCC AAATGCGCGC TGATCTCGAT GGATTCGACG CTGAAATCGA ATATTTCGGT GGGGTTGCCG CTCGACCTGC TGGTCTACGA AGCCGACTCG CTGCGCGTGA CGCGCTTTGT CGCCATCGAC GAAGAGAATC CGTACTTCGC GATGATCCGC AGCACGTGGG GCAAGCGCCT GCGCCAGGTC TTCGCCGAGA TCGAGGATCC GGACTGGCAG ACCGGCACCC ATCCCGCGCA TCCGCTGCGC CGGGCGGGCC ACCCCACCGC CGAAGTCGAG CCGGTCCGCA TCGCGCCGCC GGCCGCACCG CCCGCGGCGG AGGGCGCTGC CGTGCCGCAG CGCGCGCCGG GGCCCGCGTT CGGGCAGGGC GCCGCGGCGC AGCGCGTGGC CGGCGGATCG CACGAACCAC ACTGA
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Protein sequence | MTYCVAMRLD AGLVFLSDSR TNAGVDAIST FRKMTVFERE GDRVMVLLTA GNLAISQAVR QVLTEARDKA RSLWTARDMF EATTIVGEAV REVYDRDAAA LAKAKIDFNV SIIFGGQIGG ERPRLFNVYA AGNFIEATPE NCYFQIGEAK YGKPIIDRLI RASLPLDEAA KCALISMDST LKSNISVGLP LDLLVYEADS LRVTRFVAID EENPYFAMIR STWGKRLRQV FAEIEDPDWQ TGTHPAHPLR RAGHPTAEVE PVRIAPPAAP PAAEGAAVPQ RAPGPAFGQG AAAQRVAGGS HEPH
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