| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1123 |
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| Symbol | |
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| ID | 1219938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1181755 |
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| End bp | 1182633 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637237492 |
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| Product | hypothetical protein |
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| Protein accession | NP_519244 |
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| Protein GI | 17545842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.484773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.370646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCATCA GGGCGTCGCT TCGGGGCGGC GTTCGCGTCA CCGTGAAATA TCTGATCCAA
CATACGACGG CCTACCGCTA CGCCGAGCCG TTACGCCACA GCGTGCACGA ACTGCGGCTC
ACGCCCCGCA GCGGCCGGCT GCAGCAGGTG GATAGCTGGC AGATCCACGT GCCCGGCAAC
CTGACGCGCG CCACCGACGG GTTCGGCAAC GTCGTCCATC ACTTCACCCT GGGCGGCCGC
TCGGACACCA TCACCATCGA CGCGCGCGGC GTGGTGGAGG CGCCCGCCGA CGTGGCCGTC
GCCAGCCAGG GCTTTGCCGA TGCGCCGGAC CAGGGCCGCT ACCGCGTGTC GCCGCTGTAC
TTCCTGAGCA CGACGCCGCT GACGTCCGCG CCGCCCGAGA TGATCGCGTT CGCGCGGGAA
CACGCGCTGG TGGTGGGCAG CGCCGAGTCG GCGCTGGCAC TGGCGCACGC CGTTGCCGAG
CGCGTGCGCT ACAAGCCCAA CACCACCGAC GTCGGCACGG CCGCCGCCGA GGCCTTCGGC
CTGGGCACGG GCGTCTGCCA GGACCAGGCG CAGGTGATGG TGGCCTGCTG CCGGGCACTG
GGCGTGCCGG CGCGCTATGT CAGCGGTTAC TTCCACGCCG AGGGCGAGCC CGACCTGGCC
AGCCACGCCT GGGCCGACAT CTGCCTGGAC GCCGAGGCGC ACCTGTGGTG CAGCATCGAC
GTGACCCACC GCTGCTTCAC CGACCACCGG CACGTGCGCC TGGCGGTCGG CCGCGACTAC
CAGTCCGCCG CGCCGATCCG CGGCGTGCGC CAGGGCGGCG GGGCCGAGAC GCTGGACGTG
CGCATCTCCA TCGAGCCGCT GCCGGCCGAA GCCGCCTGA
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| Protein sequence | MSIRASLRGG VRVTVKYLIQ HTTAYRYAEP LRHSVHELRL TPRSGRLQQV DSWQIHVPGN
LTRATDGFGN VVHHFTLGGR SDTITIDARG VVEAPADVAV ASQGFADAPD QGRYRVSPLY
FLSTTPLTSA PPEMIAFARE HALVVGSAES ALALAHAVAE RVRYKPNTTD VGTAAAEAFG
LGTGVCQDQA QVMVACCRAL GVPARYVSGY FHAEGEPDLA SHAWADICLD AEAHLWCSID
VTHRCFTDHR HVRLAVGRDY QSAAPIRGVR QGGGAETLDV RISIEPLPAE AA
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