| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1116 |
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| Symbol | |
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| ID | 1219931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1172610 |
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| End bp | 1173689 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637237485 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_519237 |
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| Protein GI | 17545835 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4255] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0385568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.357874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCG AACTCACCCT AATTGTCCCG TTTTGTGCGC CGGCAGCCGA GGTGGCGGAC
GATGCTTACC GTCAATTGAC CCTGCCCGGC CTCGAAAGGT TGCTTGCCCG CGCCCGCGAG
GCCGGCCGCG AGCGCCACGA CGACGCGTAC CTGCCCACGC TGCCGCACGA GCGCTGGCTG
GCCGAGCACG CCGGACTGCC GGCGGGCACG CTGCCGTCCG CGCCGTACAT GCGCCTGGCC
GACGGCGCCG CCGCCGACAC CCGCACCTGG GCCTGCCTGC AGCCGATCCA TATCCACGCC
GCGCGGGACC ACCTGGTGAT GCTCGACCCC GGCCGGCTGC GCCTGGAAGC GGACGACGCC
GAAGCGCTGC ACCAGGCCAT CGCCCCGCTG ATCGCCGAGT CGGGTCTGAC GCTGGAGGCG
CCCCACCCCG CCCGCTGGTA CCTGGCCGAC GCGCCGTTCG GTGAACTGCG TGCCGCCGCC
CCGCAGCGCG CCGCCGGCCA CAATATCGAC ATCTGGATGC ATCAGGGCGA ACACGAACGC
GCCTGGCGCA AGTTCCAGAA CGAGGTGCAG ATGACGTGGT ACGACCACCC CGTCAACCGG
GCACGGGACG CGCGCGGCCT GCTGCCGGTC AATTCGGTGT GGCTGTTCGG CCAGGGCGCG
CTGGTCGACG CCCGGCCGAT CGCCGAGCGC ATGGTCGGCG CCGATCCGTT CTTCGCCGGC
CTGTGCCGCG CCGCCGGCGC GACCGAGCTG AGCGCCGCGA CGCTGGCCGA CCTGCCCGCC
GACGGCACCG GCGCCGCCGT GCTGCTCGAC GCCGCCGGCG CCCCGTTCCT GTCGGCCGAC
TGGTACGACT GGATCGAAGC GCTGCGCGCC TGCGACCGCG ACTGGTTCGC CCCGGCCGCC
GACGCGCTGG CCGACGGCCG CATCGACGCC GTCTCGCTGG TGCTGAGCGG CGATTCGCAC
TACGCCCACT ACCGCATCAC CCACCGCGAG CTGGCCGGCG GGCCGCTCGG CTGGCTGCGC
CGCCTGAGCC GTCCGCGCAC CCTGCGCGAT GCGCTGTCCC CGCTTTCCAT CCCTGCCTGA
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| Protein sequence | MIPELTLIVP FCAPAAEVAD DAYRQLTLPG LERLLARARE AGRERHDDAY LPTLPHERWL
AEHAGLPAGT LPSAPYMRLA DGAAADTRTW ACLQPIHIHA ARDHLVMLDP GRLRLEADDA
EALHQAIAPL IAESGLTLEA PHPARWYLAD APFGELRAAA PQRAAGHNID IWMHQGEHER
AWRKFQNEVQ MTWYDHPVNR ARDARGLLPV NSVWLFGQGA LVDARPIAER MVGADPFFAG
LCRAAGATEL SAATLADLPA DGTGAAVLLD AAGAPFLSAD WYDWIEALRA CDRDWFAPAA
DALADGRIDA VSLVLSGDSH YAHYRITHRE LAGGPLGWLR RLSRPRTLRD ALSPLSIPA
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