| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1102 |
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| Symbol | soxD2 |
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| ID | 1219914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1158859 |
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| End bp | 1159155 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637237468 |
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| Product | sarcosine oxidase subunit delta |
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| Protein accession | NP_519223 |
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| Protein GI | 17545821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.123321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGA TCGAATGTCC GTGGTGCGGG CCGCGCGCCG AATCCGAGTT CACGTGCGGC
GGCGAAGCCG ACATCGTGCG CCCGGTCGCC AACGAGAACA TGAGCGACCG TGAATGGGGT
GATTACGTGT TCATGCGCGA GAACAAGCGC GGCCTGCACC GCGAGCAATG GCTGCACACG
CAGGGTTGCC GCCGCTGGTT CAAGGTCGAG CGCGACACGC TCACCTACGA GATCAAGGGC
TACGAAACGT TTGGCGGCAT CGCCGCCCGT GCAAACGAAG GGGGCGCCAG CAAATGA
|
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| Protein sequence | MLLIECPWCG PRAESEFTCG GEADIVRPVA NENMSDREWG DYVFMRENKR GLHREQWLHT
QGCRRWFKVE RDTLTYEIKG YETFGGIAAR ANEGGASK
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