| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1101 |
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| Symbol | soxB2 |
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| ID | 1219913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1157587 |
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| End bp | 1158831 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237467 |
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| Product | sarcosine oxidase subunit beta |
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| Protein accession | NP_519222 |
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| Protein GI | 17545820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.163088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT ACTCGATATT CAACCTGTTC CGCAACGGCC TGTCGTACCA CCAGCACTGG
GAGCGGCAGT GGAAGAGTCC TGAGCCGAAG CGCGAGTACG ACGTCGTGAT CGTCGGCGGC
GGCGGGCACG GCCTGGCAAC CGCGTACTAC CTCGCGAAGG AGCACGGCAT CACCAACGTC
GCGGTGCTCG AGAAGGGCTG GATCGGCGGC GGCAATACCG CGCGCAACAC GACGATCGTG
CGCTCGAACT ATCTGTGGGA CGAATCGGCC GCGCTGTACG AGAAGGCGAT GAAGCTGTGG
GAAGGGCTGT CGCAGGACCT GAACTACAAC GTGATGTTCA GCCAGCGCGG CGTGATGAAC
CTCGCGCACA CGCTGCAGGA CGTGCGCGAC ACCGAGCGCC GCGTGAACGC GAACCGGCTG
AACGGCGTCG ACGCCGAATT CCTGACGCCT GCGCAGATCA AGGCCATCGA GCCGACGATC
AACCTGAACA GCCGCTACCC GGTGCTCGGC GCATCGATCC AGCGGCGCGC TGGCGTCGCC
CGGCATGACG CGGTGGCGTG GGGCTTCGCG CGCGGCGCGG ACCGTGCGGG TGTCGACATC
GTCCAGAACT GCCAGGTGAC GGGCATCCGC CGCGAAGGCG GCCAGGTCGT GGGCGTCGAT
ACGGTGAAGG GCTTCATCAA GGCGAAGAAG GTCGCGGTGG TCGCGGCCGG CAATACGACC
ACGCTGGCCG ACATGGCCGG CATCCGCCTG CCGATCGAAA GCCATCCGCT GCAGGCGCTG
GTGTCGGAGC CGATCAAGCC CGTCGTCAAC TCGGTGATCA TGTCGAACGC GGTGCACGCC
TACATCAGCC AGTCCGACAA GGGCGACCTC GTGATCGGCG CGGGCATCGA CCAGTACACG
GGCTTTGGCC AGCGCGGCAG CTTCCACATC ATCGAAGGCA CGCTGCAGGC CATTGTCGAG
ATGTTTCCGG TGTTCTCGCG CGTGCGGATG AACCGCCAGT GGGGCGGCAT CGTCGATGTG
TCGCCGGACG CGTGCCCGAT CATCGGCAAG ACCGACGTGA AGGGCCTGTA CTTCAACTGC
GGCTGGGGCA CGGGCGGCTT CAAGGCGACG CCGGGCTCGG GCTGGGTGTT CGCGCACACG
ATCGCGCGCG ACGAGCCGCA TCCGCTGAAC GCGCCGTTCG CGCTTGAGCG CTTCTATACG
GGGCACCTGA TCGACGAGCA CGGCGCCGCC GCCGTCGCGC ACTGA
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| Protein sequence | MSRYSIFNLF RNGLSYHQHW ERQWKSPEPK REYDVVIVGG GGHGLATAYY LAKEHGITNV
AVLEKGWIGG GNTARNTTIV RSNYLWDESA ALYEKAMKLW EGLSQDLNYN VMFSQRGVMN
LAHTLQDVRD TERRVNANRL NGVDAEFLTP AQIKAIEPTI NLNSRYPVLG ASIQRRAGVA
RHDAVAWGFA RGADRAGVDI VQNCQVTGIR REGGQVVGVD TVKGFIKAKK VAVVAAGNTT
TLADMAGIRL PIESHPLQAL VSEPIKPVVN SVIMSNAVHA YISQSDKGDL VIGAGIDQYT
GFGQRGSFHI IEGTLQAIVE MFPVFSRVRM NRQWGGIVDV SPDACPIIGK TDVKGLYFNC
GWGTGGFKAT PGSGWVFAHT IARDEPHPLN APFALERFYT GHLIDEHGAA AVAH
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