Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1092 |
Symbol | |
ID | 1219904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1149306 |
End bp | 1150208 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237458 |
Product | transcriptional regulatory DNA-binding transcription regulator protein |
Protein accession | NP_519213 |
Protein GI | 17545811 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC AAGACATCGA CCTCAACCTG CTGGTCGTCT TCAACGAATT GCTCAGGCAG CGGCGCGTTT CGGCCGTCGC CGAGACCCTC GGCATCACGC AGCCGGCGAT CAGCAATGCG CTGAACCGGC TGCGCAAGCT GCTGGGGGAT GAACTGTTCG TCCGCACATC GAAAGGGATG ATCCCGACGC CGTTTGCCGA GACGCTCGCC GAGCCGATCG CCTACGCGCT CGGGGCGATC TACAACTCGC TCAACGCCAC CTCCAGGTTC GAGCCCGCCA CCAGCACGCG CGCCTTCACG ATCGCGATGA CGGACATCGG CGAGATCTAT TTCCTGCCGA CGCTGATGCG CCGGCTGGCC AGGGACGCGC CCGGCGTCAC GGTCAGTACG GTGCGCAACC ACGCCGATAC GTTGCGCGAT GAGATGGAAG CGGGGCGCGT GGACCTGGCG ATCGGTTTCC TGCCCGACCT GAAGTCGGGC TTCTTCCAGC GCCGGCTGTT CCGGCAGCGC TATGTGTGCC TGTTCCGCAA GGGCCATCCG CTGGCCAAGC GCGGCATGAC GATGGAGGGT TTTCTGGAGG CCGAGCATGT GTCGATCGTC GCGGAAGGCA CCGGCCACGG CATGGTGGAC GCGACGATCC TGCGCGCCGG CCTGCCGCGG CGCGTGAGCC TGCATGTGCC GCACTTCATC GCGCTCGGGC ACATCCTGCA GTCGACCGAC CTGATCGCGG TGGTCCCGCA GGCGTACGCG ACGCGCACGC TCAAGCCGTT CGGCCTCGAC ACGGCCGCGT GTCCGGTCAA AATTCCGGAC ATCACCATCA ACGTGCTCTG GCACGCGCGC AACCACCGCG AGCCCGGGAA CCAGTGGCTG CGGCAGTTGC TGTTCGAGAC CTTTGCGATC TAG
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Protein sequence | MELQDIDLNL LVVFNELLRQ RRVSAVAETL GITQPAISNA LNRLRKLLGD ELFVRTSKGM IPTPFAETLA EPIAYALGAI YNSLNATSRF EPATSTRAFT IAMTDIGEIY FLPTLMRRLA RDAPGVTVST VRNHADTLRD EMEAGRVDLA IGFLPDLKSG FFQRRLFRQR YVCLFRKGHP LAKRGMTMEG FLEAEHVSIV AEGTGHGMVD ATILRAGLPR RVSLHVPHFI ALGHILQSTD LIAVVPQAYA TRTLKPFGLD TAACPVKIPD ITINVLWHAR NHREPGNQWL RQLLFETFAI
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