Gene RSc1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1092 
Symbol 
ID1219904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1149306 
End bp1150208 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID637237458 
Producttranscriptional regulatory DNA-binding transcription regulator protein 
Protein accessionNP_519213 
Protein GI17545811 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC AAGACATCGA CCTCAACCTG CTGGTCGTCT TCAACGAATT GCTCAGGCAG 
CGGCGCGTTT CGGCCGTCGC CGAGACCCTC GGCATCACGC AGCCGGCGAT CAGCAATGCG
CTGAACCGGC TGCGCAAGCT GCTGGGGGAT GAACTGTTCG TCCGCACATC GAAAGGGATG
ATCCCGACGC CGTTTGCCGA GACGCTCGCC GAGCCGATCG CCTACGCGCT CGGGGCGATC
TACAACTCGC TCAACGCCAC CTCCAGGTTC GAGCCCGCCA CCAGCACGCG CGCCTTCACG
ATCGCGATGA CGGACATCGG CGAGATCTAT TTCCTGCCGA CGCTGATGCG CCGGCTGGCC
AGGGACGCGC CCGGCGTCAC GGTCAGTACG GTGCGCAACC ACGCCGATAC GTTGCGCGAT
GAGATGGAAG CGGGGCGCGT GGACCTGGCG ATCGGTTTCC TGCCCGACCT GAAGTCGGGC
TTCTTCCAGC GCCGGCTGTT CCGGCAGCGC TATGTGTGCC TGTTCCGCAA GGGCCATCCG
CTGGCCAAGC GCGGCATGAC GATGGAGGGT TTTCTGGAGG CCGAGCATGT GTCGATCGTC
GCGGAAGGCA CCGGCCACGG CATGGTGGAC GCGACGATCC TGCGCGCCGG CCTGCCGCGG
CGCGTGAGCC TGCATGTGCC GCACTTCATC GCGCTCGGGC ACATCCTGCA GTCGACCGAC
CTGATCGCGG TGGTCCCGCA GGCGTACGCG ACGCGCACGC TCAAGCCGTT CGGCCTCGAC
ACGGCCGCGT GTCCGGTCAA AATTCCGGAC ATCACCATCA ACGTGCTCTG GCACGCGCGC
AACCACCGCG AGCCCGGGAA CCAGTGGCTG CGGCAGTTGC TGTTCGAGAC CTTTGCGATC
TAG
 
Protein sequence
MELQDIDLNL LVVFNELLRQ RRVSAVAETL GITQPAISNA LNRLRKLLGD ELFVRTSKGM 
IPTPFAETLA EPIAYALGAI YNSLNATSRF EPATSTRAFT IAMTDIGEIY FLPTLMRRLA
RDAPGVTVST VRNHADTLRD EMEAGRVDLA IGFLPDLKSG FFQRRLFRQR YVCLFRKGHP
LAKRGMTMEG FLEAEHVSIV AEGTGHGMVD ATILRAGLPR RVSLHVPHFI ALGHILQSTD
LIAVVPQAYA TRTLKPFGLD TAACPVKIPD ITINVLWHAR NHREPGNQWL RQLLFETFAI