Gene RSc1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1091 
SymbolnagAa 
ID1219903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1148186 
End bp1149172 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID637237457 
Productferredoxin oxidoreductase protein 
Protein accessionNP_519212 
Protein GI17545810 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA CCCTCACCCC GCTGCAGCGC GTCGTCAGCG CGCGCGCCGG CGATAACCTG 
CTCGAAGTGC TGCGCGCGCA TCAGGTTCCC ATCTCGTACA GCTGCCTGTC GGGACGCTGC
GGAACGTGCC GCTGCCGCGT GCTCTCGGGC AACGTCGTCG CCACCGGCGG CACCGAGATC
AACGCGCCCT CCGCGCCGGG CCAGACCGTG CTGGCCTGCC AGACGACGCT GGTCGAAGAC
TGCGCGATCG AACTGCCCGA GGTGGACGAG ATCGTCGTGC ACCCGGCCAG GATCATCAAA
TCGAAGGTCG TCGCGATCGA GGACATGACG CACGACATCA AGCGGATCCG CCTGGAGCTG
GCCAAGCCGC TCGCGTTCTC GCCGGGCCAG TACGCGACCC TGCAGTTCAC GCCGCGGCAT
GTGCGGCCCT ACTCCATGGC GTTCGCCGAT GCGGGACAGG CGCTGGAGTT CCATGTGCGG
CTGGTGCCGG GCGGACGCGT GACCTCCTAC GTGGCGGCCG AACTCAAGGT CGGGGACGAC
GTGCGCGTCA GCGGCCCGCT GGGCACGGCC TACCTGCGCC GTAAAAACAC CGATCCGGTC
ATCTGCGTGG CCGGCGGCAC GGGGCTTGCG CCCATCCTCT CCATCCTGCG GGGCATGGCC
GAGGCCGGCA TGGCCAATCC GGTCCACGTC TACTTCGGCG TGCGCTCGCC GGCCGATGTG
TACGGAACGC ACTGGCTGGA CGCCCTGCGC GAACGCCTGC CGAACTTGCA CACGCATGTC
GTCGTCGCCA CCTCCAGCGC GGATGCGCGC TACCGCTCGG GCGTCGTCAC CGACGCCGTC
GCGAGCGACT GGGGCGACCT GCGGGGATGG CGCGCCTACC TGGCCGGGGC ACCGGTCATG
GTGGATGCGG CCAGCCTGTT GCTACGCCAG CGCGGCGTGC CGGCCGAACA CGTCTACGCC
GATGCGTTCT ACGCGGTGGG CGTCTGA
 
Protein sequence
MDVTLTPLQR VVSARAGDNL LEVLRAHQVP ISYSCLSGRC GTCRCRVLSG NVVATGGTEI 
NAPSAPGQTV LACQTTLVED CAIELPEVDE IVVHPARIIK SKVVAIEDMT HDIKRIRLEL
AKPLAFSPGQ YATLQFTPRH VRPYSMAFAD AGQALEFHVR LVPGGRVTSY VAAELKVGDD
VRVSGPLGTA YLRRKNTDPV ICVAGGTGLA PILSILRGMA EAGMANPVHV YFGVRSPADV
YGTHWLDALR ERLPNLHTHV VVATSSADAR YRSGVVTDAV ASDWGDLRGW RAYLAGAPVM
VDAASLLLRQ RGVPAEHVYA DAFYAVGV