| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1079 |
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| Symbol | gudD1 |
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| ID | 1219891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1134803 |
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| End bp | 1136164 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237445 |
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| Product | glucarate dehydratase protein |
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| Protein accession | NP_519200 |
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| Protein GI | 17545798 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.786774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGATCA TGAATCACAA CTCCGTGGAA TATGCTGTCC GCACGCCGCG CATCACGCGC
CTCCAGGTCA TTCCGGTGGC GGGGCGCGAC AGCATGCTGC TCAACCTGAG CGGCGCGCAC
GCGCCGTTCT TCACCCGCAA CATCGCCATC CTGGAAGATT CCGACGGCCA TCTCGGCGTG
GGCGAAGTGC CGGGCGGCGA GGCGATCCGC AAGACCATCG AGGATGCGGC GCCGCTGGTG
GTCGGCCAGT CGATCGGCGC CTACAACAAC GTGCTGAACA CGGTGCGCCA GCGCTTCGCC
GACCGCGATG CCACCGGGCG CGGCACGCAG ACGTTCGACC TGCGCACCAC CGTGCACGCG
GTGACCGCGC TGGAGAGCGC GCTGCTTGAC CTGCTCGGCC AGCATCTGGG CGTGCCGGTG
GCGGCCTTGC TGGGGCAGGG CCAGCAGCGT GCCACGGTGC CGGTGCTCGG CTACCTGTTC
TTCGTGGGCG ATCGCACCCG CACCGACCTG GACTACGCCG ATGGCAGCGA CGCGACCGAC
GACTGGACGC ACCTGCGCCA CCAGGAGGCG CTGACGCCGG AGGCGGTGGT GAAGCTGGCG
CGGGCGGCCC ATGCGCGCTA CGGCTTCAAG GATTTCAAGC TCAAGGGCGG CGTGCTCAGC
GGCGACGATG AGATGACGGT GACGACCGCG CTGGCCGAAG CCTTCCCCGA GGCGCGCGTC
ACGCTCGACC CGAACGGTGC CTGGTCGCTG GCCGAGGCGG TCCGCCTGTG CCGCGACAAG
CACGGCGTGC TGGCCTATGC CGAAGACCCG TGCGGCGCGG AGAACGGCTA TTCCGGACGC
GAGGTCATGG CCGAATTCCG CCGCGCCACC GGGCTGCCCA CCGCGACCAA CATGATCGCC
ACCGACTGGC GCCAGATGTG CCACGCGGTC CAGCTGCACG CCGTGGATAT CCCGCTGGCC
GACCCGCATT TCTGGACCCT GCAGGGCTCG GTGCGCGTGG CGCAGATGTG TGCCGAGTGG
GGCCTGACTT GGGGCTCGCA CTCCAACAAC CATTTCGACA TTTCGCTGGC CATGTTCACG
CACGTGGCCG CGGCGGCGCC GGGCAACATC ACCGCCATCG ACACGCATTG GATCTGGCAG
GACGGCCAGC GCCTGACGTG CGAGCCGTTG CGCATCGCCG GCGGCGAGAT CGCCGTGCCG
ACCGCGCCGG GGCTGGGCGT CACGCTCGAC ATGGCGCAGC TGGAGAAGGC CCATGCGCTG
TACAAGCAGC ACGGGCTGGG CGCGCGCGAC GATGCCGCCG CGATGCGCTG CCTGGTGCCG
GGCTGGCAGT TCGACAACAA GCGGCCGTGC CTGGTGCGCT GA
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| Protein sequence | MTIMNHNSVE YAVRTPRITR LQVIPVAGRD SMLLNLSGAH APFFTRNIAI LEDSDGHLGV
GEVPGGEAIR KTIEDAAPLV VGQSIGAYNN VLNTVRQRFA DRDATGRGTQ TFDLRTTVHA
VTALESALLD LLGQHLGVPV AALLGQGQQR ATVPVLGYLF FVGDRTRTDL DYADGSDATD
DWTHLRHQEA LTPEAVVKLA RAAHARYGFK DFKLKGGVLS GDDEMTVTTA LAEAFPEARV
TLDPNGAWSL AEAVRLCRDK HGVLAYAEDP CGAENGYSGR EVMAEFRRAT GLPTATNMIA
TDWRQMCHAV QLHAVDIPLA DPHFWTLQGS VRVAQMCAEW GLTWGSHSNN HFDISLAMFT
HVAAAAPGNI TAIDTHWIWQ DGQRLTCEPL RIAGGEIAVP TAPGLGVTLD MAQLEKAHAL
YKQHGLGARD DAAAMRCLVP GWQFDNKRPC LVR
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