| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1075 |
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| Symbol | |
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| ID | 1219887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1129767 |
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| End bp | 1132121 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637237441 |
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| Product | two-component system sensor histidine kinase transcription regulator protein |
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| Protein accession | NP_519196 |
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| Protein GI | 17545794 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.708175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTC CGGCAACGCC CGTTCCCGAT AGGCAGGCGG CCCGCGCCGT GGCGCTGCGG
CCGGGGTTGC GTGCGCTGCT GGAGTGGGTG CTGCTGGTGG CGCTGGCCGT GCTGCTGACG
TTCGGCGCGG TGCGCTGGAG CGTGGTGGCG CGCCTGGATG CGGCGCTCTA CGACACGGTG
CTGTCGCTGC ATGGCCACGC GCCGCGCGAC GATATCGTCA TTGTCGCCAT CGACGACCAG
AGCCTCGAAG CCGTCGGCCG CTGGCCCTGG CCGCGTGCGC GCCTGGCTGA ACTGGTGGCG
CGCGTGGGCG CGGCGCATCC GCGTGCGGTC GGCGTCGATA TCCTGCTGAT CGAACCCGAT
CTGACCGACC CGGAAGGCGA TCGCGCGCTG GCGGCGGCCT TTGCGCAGGC GGGCCAGGTC
ATCCTGCCGG CGCTGCCCGA GCGCACCGGG CAGGGGCGGG TGTTCCACTA TCCCTTCCTC
GGGATCGGCA CGCACGTCGC GCACATCGAT GCGGCGCCCG ACCCGGACAG CGTGGTGCGC
GGTCTCTACC TGGCCGAGGG CCCGCGCGGA CATCTGCTCG ACCACCTCGC GCTGCAGCTG
GCCCGGCAGG CAGGCCCCGC ACTGGCGGGC GACGTGCCGC GCCGCACGGA GATCGATGCC
GACGGCTGGG CGCGCCGGGC CAACATTGGC GTGAACTTTG CCGGGCCGGC GGGCACGTTC
CGGCATGTGC CCGCGCTGAC CCTGCTGCAA GGCGGGGTGC CGGCCGACGC CTTCTCGGGC
AAGCTGGTGC TGATCGGCGC GACGGCATCC GGCGTGTCCG ATATCTTTGC CACGCCGACC
TCGCGCACGA TGAGCGGCGT GGAGGTGCTG GCCAACGCCA CGCAGACCCT GCTCGACGGC
AATGCGATCC TGCCTGCCTC GCGCACCGTG TTCTGGCTGG TGACGCTGCT GCCGCTGAGC
CTGACCGCGT GCGCGCTGCT CTGGCTGACA CCGCGCATGG CGCTGACGGC GGCGCTGGGG
AGCGCGGGGC TGCTGCTGGT GGGCGTGGTG GCGGCGCTGG CCGGCTGGAA CCGCTGGCTG
CCGCCGTTCG CGGCGCTGGT CGGGCCGCTG GTGCTGTACC CGCTGTGGAG CTGGCGGCAG
CAGGAGGCGG CGCTGCGCTT CCTGCGCGAC GAGCTGCACC GGCTGGCGCG CGAGCCGGGC
CTGCTGGCCG GCACCGGCCC GCTGGCGCAG ACCGGCCGTA CGCTGGATGC CCATATGGAC
GCAGTGGCGT CGCTCACCGA CAAGCTGCGC GGGCTGCGCC GCTTCCTCGC CGAAGCGCTG
GAGAGCCTGC CCGACGCCAC CGTCATCTGC ACGCACGACG GCGACATCCG CCTGGCCAAC
GGGCGCAGCG CCGACCTCGC GGCGCAGGCG CCGGTGTCCG GGCAGGACCG CGCCGCCGCC
CTGCGCGATC TGCCGACCCT GCTGGCCTGC GCCTTTGAGG ATCCGGCACC CGGCCAGCAC
TACTGGACAC GCTGGCTGAC CGCGCCCGAC ACCGCGCAGG AACCGGTGGA GCTGCGCACG
CGCGACGGGC GCTCGATGCT GATGCATGCG GCCGCGCTGC GCGACGATGC CGGCCGGCCG
ATGGACATCA TCGTCAGCTT CGCCGACATC ACCGCCGTGC GGCAGGCCGA GCGCCACCGC
GAGGAGGCGC TGCGCTTCAT CTCGCACGAC ATGCGCTCGC CGCAGAGCGC CATCCTGGCG
CTGATCGAGC TGCAGCGCGA TGCGGGCCGG GCGCTCGGCC ACGAGGCACT GCTGGCGCGC
ATCCAGCAGC TGTCGTCGCG GACGCTGGAG CTGGCCGATG CCTTCATCGA CCTGGCGCGT
GTGGAATCGC AGGAGCTCAA GCTGACCGAC GTGGACCTGG TCGGCCTCGT GCTCGATGCC
GCCGACGAGG TCTGGGCGCT GGCGAACCAT CACCAGATCG AGGTGCGCGT CGATGCCGAT
CTCGAGGCTT CGGTGCGCGG CGAGCCGCGC ATGCTGGTCC GTGCGCTGGT CAACCTGGTG
AACAACGCCA TCAAGTTCAG CCCGCGCGGC ACGACCGTCA CGGTGGCCGT ACGCGGGGAC
GCGGACAGCT TCGCCGTGAG CGTGGCGGAC CAGGGCGTGG GCATCGCGGC CGAGGACCAG
GCGCAGCTGT TCCAGCCGTT CCGCCGGCTG CATGAGGCGG TGGCCGATGC GCCATCGGGC
AGCGGCCTGG GGCTGGTGTT CGTCAAGACG GTGGTGGAGC GGCACGGCGG TCGCATCGCG
GTGCGGAGCG TGCCTGGGCA CGGGGCGACC TTCACGCTGT GGCTGCCGCG CGCATCGCGT
CCCGGGGCGT TCTGA
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| Protein sequence | MTGPATPVPD RQAARAVALR PGLRALLEWV LLVALAVLLT FGAVRWSVVA RLDAALYDTV
LSLHGHAPRD DIVIVAIDDQ SLEAVGRWPW PRARLAELVA RVGAAHPRAV GVDILLIEPD
LTDPEGDRAL AAAFAQAGQV ILPALPERTG QGRVFHYPFL GIGTHVAHID AAPDPDSVVR
GLYLAEGPRG HLLDHLALQL ARQAGPALAG DVPRRTEIDA DGWARRANIG VNFAGPAGTF
RHVPALTLLQ GGVPADAFSG KLVLIGATAS GVSDIFATPT SRTMSGVEVL ANATQTLLDG
NAILPASRTV FWLVTLLPLS LTACALLWLT PRMALTAALG SAGLLLVGVV AALAGWNRWL
PPFAALVGPL VLYPLWSWRQ QEAALRFLRD ELHRLAREPG LLAGTGPLAQ TGRTLDAHMD
AVASLTDKLR GLRRFLAEAL ESLPDATVIC THDGDIRLAN GRSADLAAQA PVSGQDRAAA
LRDLPTLLAC AFEDPAPGQH YWTRWLTAPD TAQEPVELRT RDGRSMLMHA AALRDDAGRP
MDIIVSFADI TAVRQAERHR EEALRFISHD MRSPQSAILA LIELQRDAGR ALGHEALLAR
IQQLSSRTLE LADAFIDLAR VESQELKLTD VDLVGLVLDA ADEVWALANH HQIEVRVDAD
LEASVRGEPR MLVRALVNLV NNAIKFSPRG TTVTVAVRGD ADSFAVSVAD QGVGIAAEDQ
AQLFQPFRRL HEAVADAPSG SGLGLVFVKT VVERHGGRIA VRSVPGHGAT FTLWLPRASR
PGAF
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