| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1074 |
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| Symbol | |
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| ID | 1219886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1128092 |
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| End bp | 1129798 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637237440 |
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| Product | signal peptide protein |
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| Protein accession | NP_519195 |
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| Protein GI | 17545793 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.107534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.60277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGC ACACTGAGCC GCGGCCGCGC GGCTGGTTCG GTCTGGTCGC CTCGATCGGT
GCGGCGCTAC TGTGCTGTGC GATGTGGCGG CCGGCCACGG CGCAGCCGTC CGGCGCGGAC
GGCAACGATT TTCTCTACCG GGTGCAGCAG GGCGATACGC TGATCACCCT GGCCGCGCGC
TACATGGACG ACGCGGAAGG CTGGCGCCTG CTGCAGCAGC GCAACCATAT CGCCAACCCG
TACAAATTGC CGCCGGGCTC CATCGTGCGC ATTCCGTTCG ACCGGATTCC CGTCGTGCCG
GCGGCCGCGC AGGTCGTGTT TGCGCGCGAT GCCGTGAATG GCGACCGCAA GCCGCTGCAG
GCGGGAATGA AGTTGTCCGA GGACACCCTG ATCGAGACCG GCGCGAAGGG CGCGATCACG
CTGGCCTTTG ACGACGGCAC GCGCGTGACG GTGCCGCCCG GCAGCCGCGT GACGCTGGCG
CGCGTGCGCA GTTTCGCCCG CACGGGGCTG ATCGACGTGC GGCTGCAGGT CAAGGAGGGC
GAGGTGGAGT CCACGGTGTC GCCCAGGAAG ACCGGCGTGG GCCGCTATGA GATCTCGACG
CCGGCCCTGG TGACGGGCGT GCGCGGCACG CGTTTCCGTG TGCGGGCGGA CGGCGGGGCA
TCGACGGAGT CCGTGCTGGA GGGCAAGGTG GCGGTGCGCG CGGGGCGGCA GGCGCAGGCG
GTTGGGGCCG GGTTTGGCGT GCGTGCCGCC GGCGGTCGCC TGAAGCGGGC CGTGTTGCCT
GCCGCGCCCA GGCTCGATGC GGTGCCGGAA CTGGTGCAGA CGCCGTGCTT CAGGCCGACG
TGGCAGCCGG TCAAGGGCGC CGTGGCCTAT CGCGCGGTGA TTGCGCGCGA TCCGGAACAG
ACCGAGATCC TGTCCTACCA ACTGAGCCAG ACGCCCGCGG CCACGCTGTG CGGCGATGAG
GACGGCACGT ACACGCTGGC GGTGCAGAGC GTCGATGCGC TCGGCCTGTC CGGCCCTTCG
GTGGCGCGGC CGTTTACGGT GCGCTTGCAT CCCGAGGCGC CGTACATGAT CCAGCCGGCG
AAAGACAAGC CCTATCGCAG CGGGGAAACG GTCTTCGCCT GGGCCAGCGT GGCCGAGGCG
GCAACCTATG ATCTCGAGGC CGCCGCCGCG TCCGACTTCG CACAGCCCGC GGTCCGGCAG
CACGGCCCGG AGGTGCGGGT CACGCAGCCG CTGCGGCCGG GCACCTGGTG GTGGCGCGTG
CGCTCGGTCG ACAAGGACGG CAAGGCCGGA CCGTGGAGCG ATGCGGTGTC GTTCCGCGCG
CTCGACATTC CCGCCGATGC GGTGCCGCCG CCCTCGGCCG GTGCCGGCGA CGACGGCATG
CTGCACGCAC ACTGGCGCGC GCTGGATCCC GCGCTGGCTG CCGCCGGCGC GCGCACGCGT
GTCCAGTTGG CCGCCGAGCC GACCTTCGCC AAGCCGGTGG CCGATCTCGT CAGCGACGGC
AACGAGGCGA CGATTCCGCT GCCGCCGGCC GGGCCGTACT ACATCCGCAC CGGCATCGAC
CTCGGCGATG CGGCATCGGT GGTGTTCGCG CGGCCGCAGC GCATCGACAT CGGCAGTTTC
GTCGTCGATG CGCTGGGTGC GCCCGTGCAG AGCAGCGGGT CGAGCCTCCT CCTTGATGAC
CGGTCCGGCA ACGCCCGTTC CCGATAG
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| Protein sequence | MPKHTEPRPR GWFGLVASIG AALLCCAMWR PATAQPSGAD GNDFLYRVQQ GDTLITLAAR
YMDDAEGWRL LQQRNHIANP YKLPPGSIVR IPFDRIPVVP AAAQVVFARD AVNGDRKPLQ
AGMKLSEDTL IETGAKGAIT LAFDDGTRVT VPPGSRVTLA RVRSFARTGL IDVRLQVKEG
EVESTVSPRK TGVGRYEIST PALVTGVRGT RFRVRADGGA STESVLEGKV AVRAGRQAQA
VGAGFGVRAA GGRLKRAVLP AAPRLDAVPE LVQTPCFRPT WQPVKGAVAY RAVIARDPEQ
TEILSYQLSQ TPAATLCGDE DGTYTLAVQS VDALGLSGPS VARPFTVRLH PEAPYMIQPA
KDKPYRSGET VFAWASVAEA ATYDLEAAAA SDFAQPAVRQ HGPEVRVTQP LRPGTWWWRV
RSVDKDGKAG PWSDAVSFRA LDIPADAVPP PSAGAGDDGM LHAHWRALDP ALAAAGARTR
VQLAAEPTFA KPVADLVSDG NEATIPLPPA GPYYIRTGID LGDAASVVFA RPQRIDIGSF
VVDALGAPVQ SSGSSLLLDD RSGNARSR
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