Gene RSc1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1071 
SymboluvrC 
ID1219880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1123491 
End bp1125455 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content70% 
IMG OID637237434 
Productexcinuclease ABC subunit C 
Protein accessionNP_519192 
Protein GI17545790 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000538512 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.216036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCCAC CGGGCGCCCA GACGCCACCC GCACCCGCCG TCGACCCGAG CGAGGCGGCT 
TTCGATGCCA AGGCCCACAT CGCCCGCCTG CCCAGCCTGC CGGGCGTCTA CCGCTACTTC
GATGCGCAGG GCAGCGTGCT CTACGTCGGG AAGGCACGCG ATCTGAAGAA GCGCGTCTCG
AGCTATTTCA CCAAGACGCT GCTGTCGCCG CGCATCGCGA TGATGGTGGC GAAGATCGCG
CATATCGAGA CCACCGTGGT GCGCAGCGAG GCCGAGGCGC TGCTGCTGGA GAACAACCTG
ATCAAGGCGC TGGCGCCGCG CTACAACATC CTGTTCCGCG ACGACAAGTC GTACCCCTAC
CTGAAGCTCA CGCAGCATGC GTATCCGCGC ATGGCGTACT ACCGCGGCGC GACCGATCGC
AAGCACCAGT ACTTCGGCCC GTTCCCGAGC GCGCATGCGG TGCGCGAGAG CATGCAGATC
CTGCAGAAGG TGTTCCAGCT GCGCACGTGC GAGGACACGG TGTTCAATAA CCGCACGCGG
CCGTGCCTGC TGCACCAGAT CCACCGCTGC ACCGCCCCAT GCGTGCAGGC GATCAGCGCG
GAAGACTATG CCCGCGACGT GGCCAACGCC GCGGGCTTCC TGCTGGGCCG GCAGGATGAG
GTCATGCAGA CCCTGCAGGA CAAGATGCAG CGGCATGCCG CGGCGCTGGA GTTCGAGCAG
GCCGCGACGG TGCGCGACCA GATCGGGGCA CTGTCGACGG TGCTCACGCG GCAGTCGGTG
GAGGAGGTCG GCCAGGCCAG CGATATCGAC ATCCTCGCCG TGGCGATCAA GGGCGGCCAT
GCCTGCGTGA ACCTGGCGAT GGTGCGCGGC GGCCGGCACC TCGGCGACAA GGCGTACTTT
CCGACCCACG TGGAGGAGGG GGCCGCCATC GTCGGCGTGG ACGTCGAGGC CGACGTGCCG
GAAGGCGCCG AGACGCAGCC CGAGCCGGCG CGCGATCCCG AGCGTATGGC GCGCGACATT
CTCGAGGCCT TCGTCGCGCA GCATTATCTC GACCAGTTCG TGCCGCCGGT GCTGGTGGTC
AGCCACCCGA TCCGGGCGGC CGGGCTGATC GAGGCGCTGG CCGCGCAGGC CGGGCGGCGC
GTGTCGGTGG TGCGACAGCC GCAGGGCGCG CGCCGCGCCT GGCTGGAGAT GGCGGAGAAG
GGCGCGGAGC TGTCGCTGGC GCGGCGGCTG TCGGAGCAGG GTAGCCAGCA GGCCCGCACG
CGCGCGCTGG CCGAGACCAT CGGCGTCGAT CTGGAAGACC TCGCCGCCCT GCGCGTCGAG
TGCTTCGACA TCAGCCACAC CGCCGGCGAG GCGACGCAGG CATCGTGCGT GGTCTTTCAC
AGCCACGCCA TGCAGAACGG CGAATACCGC CGCTACAACA TCCAGGACAT CATTCCCGGC
GACGACTACG CCGCCATGCG CCAGGTGCTG ACGCGCCGCT ACCAGAAGGT GGTCGAGCAG
GCCGCCGAGG ATGCGCCCGA CATGCCCCGC GTCGTGCTGA TCGACGGCGG CAAGGGGCAG
GTGGAAGTGG CGCGCCAAGT CTTCGAGGAG CTGGGGCTGG ACATTGGCCT GCTGGTCGGC
GTGGCCAAGG GCGAAGGCCG CAAGGTCGGT CTGGAGACGC TGGTCTTCGC CGACGGGCGG
CCGTCGCTGG AGTTGGGGCA GGGCAGCGCC GCGCTGATGC TGGTCGCGCA GATTCGCGAC
GAGGCGCACC GCTTCGCCAT CACCGGCATG CGCGCCAAGC GGGCCAAGGC GCGCAACACC
TCGCGGCTGG AGGAGATCGA AGGCATCGGG GCCAAGCGGC GGCAGCGGCT GCTGGCGCGC
TTTGGCGGCC TGCGCGGCGT GATGGCCGCC AGCGTGGAGG AGCTGGCCAC GGTCGAGGGC
ATCTCGCAGA CGCTGGCCGA AGAAATCTAC CGCCAATTGC ACTGA
 
Protein sequence
MPPPGAQTPP APAVDPSEAA FDAKAHIARL PSLPGVYRYF DAQGSVLYVG KARDLKKRVS 
SYFTKTLLSP RIAMMVAKIA HIETTVVRSE AEALLLENNL IKALAPRYNI LFRDDKSYPY
LKLTQHAYPR MAYYRGATDR KHQYFGPFPS AHAVRESMQI LQKVFQLRTC EDTVFNNRTR
PCLLHQIHRC TAPCVQAISA EDYARDVANA AGFLLGRQDE VMQTLQDKMQ RHAAALEFEQ
AATVRDQIGA LSTVLTRQSV EEVGQASDID ILAVAIKGGH ACVNLAMVRG GRHLGDKAYF
PTHVEEGAAI VGVDVEADVP EGAETQPEPA RDPERMARDI LEAFVAQHYL DQFVPPVLVV
SHPIRAAGLI EALAAQAGRR VSVVRQPQGA RRAWLEMAEK GAELSLARRL SEQGSQQART
RALAETIGVD LEDLAALRVE CFDISHTAGE ATQASCVVFH SHAMQNGEYR RYNIQDIIPG
DDYAAMRQVL TRRYQKVVEQ AAEDAPDMPR VVLIDGGKGQ VEVARQVFEE LGLDIGLLVG
VAKGEGRKVG LETLVFADGR PSLELGQGSA ALMLVAQIRD EAHRFAITGM RAKRAKARNT
SRLEEIEGIG AKRRQRLLAR FGGLRGVMAA SVEELATVEG ISQTLAEEIY RQLH