Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1071 |
Symbol | uvrC |
ID | 1219880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1123491 |
End bp | 1125455 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237434 |
Product | excinuclease ABC subunit C |
Protein accession | NP_519192 |
Protein GI | 17545790 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000538512 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.216036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCCAC CGGGCGCCCA GACGCCACCC GCACCCGCCG TCGACCCGAG CGAGGCGGCT TTCGATGCCA AGGCCCACAT CGCCCGCCTG CCCAGCCTGC CGGGCGTCTA CCGCTACTTC GATGCGCAGG GCAGCGTGCT CTACGTCGGG AAGGCACGCG ATCTGAAGAA GCGCGTCTCG AGCTATTTCA CCAAGACGCT GCTGTCGCCG CGCATCGCGA TGATGGTGGC GAAGATCGCG CATATCGAGA CCACCGTGGT GCGCAGCGAG GCCGAGGCGC TGCTGCTGGA GAACAACCTG ATCAAGGCGC TGGCGCCGCG CTACAACATC CTGTTCCGCG ACGACAAGTC GTACCCCTAC CTGAAGCTCA CGCAGCATGC GTATCCGCGC ATGGCGTACT ACCGCGGCGC GACCGATCGC AAGCACCAGT ACTTCGGCCC GTTCCCGAGC GCGCATGCGG TGCGCGAGAG CATGCAGATC CTGCAGAAGG TGTTCCAGCT GCGCACGTGC GAGGACACGG TGTTCAATAA CCGCACGCGG CCGTGCCTGC TGCACCAGAT CCACCGCTGC ACCGCCCCAT GCGTGCAGGC GATCAGCGCG GAAGACTATG CCCGCGACGT GGCCAACGCC GCGGGCTTCC TGCTGGGCCG GCAGGATGAG GTCATGCAGA CCCTGCAGGA CAAGATGCAG CGGCATGCCG CGGCGCTGGA GTTCGAGCAG GCCGCGACGG TGCGCGACCA GATCGGGGCA CTGTCGACGG TGCTCACGCG GCAGTCGGTG GAGGAGGTCG GCCAGGCCAG CGATATCGAC ATCCTCGCCG TGGCGATCAA GGGCGGCCAT GCCTGCGTGA ACCTGGCGAT GGTGCGCGGC GGCCGGCACC TCGGCGACAA GGCGTACTTT CCGACCCACG TGGAGGAGGG GGCCGCCATC GTCGGCGTGG ACGTCGAGGC CGACGTGCCG GAAGGCGCCG AGACGCAGCC CGAGCCGGCG CGCGATCCCG AGCGTATGGC GCGCGACATT CTCGAGGCCT TCGTCGCGCA GCATTATCTC GACCAGTTCG TGCCGCCGGT GCTGGTGGTC AGCCACCCGA TCCGGGCGGC CGGGCTGATC GAGGCGCTGG CCGCGCAGGC CGGGCGGCGC GTGTCGGTGG TGCGACAGCC GCAGGGCGCG CGCCGCGCCT GGCTGGAGAT GGCGGAGAAG GGCGCGGAGC TGTCGCTGGC GCGGCGGCTG TCGGAGCAGG GTAGCCAGCA GGCCCGCACG CGCGCGCTGG CCGAGACCAT CGGCGTCGAT CTGGAAGACC TCGCCGCCCT GCGCGTCGAG TGCTTCGACA TCAGCCACAC CGCCGGCGAG GCGACGCAGG CATCGTGCGT GGTCTTTCAC AGCCACGCCA TGCAGAACGG CGAATACCGC CGCTACAACA TCCAGGACAT CATTCCCGGC GACGACTACG CCGCCATGCG CCAGGTGCTG ACGCGCCGCT ACCAGAAGGT GGTCGAGCAG GCCGCCGAGG ATGCGCCCGA CATGCCCCGC GTCGTGCTGA TCGACGGCGG CAAGGGGCAG GTGGAAGTGG CGCGCCAAGT CTTCGAGGAG CTGGGGCTGG ACATTGGCCT GCTGGTCGGC GTGGCCAAGG GCGAAGGCCG CAAGGTCGGT CTGGAGACGC TGGTCTTCGC CGACGGGCGG CCGTCGCTGG AGTTGGGGCA GGGCAGCGCC GCGCTGATGC TGGTCGCGCA GATTCGCGAC GAGGCGCACC GCTTCGCCAT CACCGGCATG CGCGCCAAGC GGGCCAAGGC GCGCAACACC TCGCGGCTGG AGGAGATCGA AGGCATCGGG GCCAAGCGGC GGCAGCGGCT GCTGGCGCGC TTTGGCGGCC TGCGCGGCGT GATGGCCGCC AGCGTGGAGG AGCTGGCCAC GGTCGAGGGC ATCTCGCAGA CGCTGGCCGA AGAAATCTAC CGCCAATTGC ACTGA
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Protein sequence | MPPPGAQTPP APAVDPSEAA FDAKAHIARL PSLPGVYRYF DAQGSVLYVG KARDLKKRVS SYFTKTLLSP RIAMMVAKIA HIETTVVRSE AEALLLENNL IKALAPRYNI LFRDDKSYPY LKLTQHAYPR MAYYRGATDR KHQYFGPFPS AHAVRESMQI LQKVFQLRTC EDTVFNNRTR PCLLHQIHRC TAPCVQAISA EDYARDVANA AGFLLGRQDE VMQTLQDKMQ RHAAALEFEQ AATVRDQIGA LSTVLTRQSV EEVGQASDID ILAVAIKGGH ACVNLAMVRG GRHLGDKAYF PTHVEEGAAI VGVDVEADVP EGAETQPEPA RDPERMARDI LEAFVAQHYL DQFVPPVLVV SHPIRAAGLI EALAAQAGRR VSVVRQPQGA RRAWLEMAEK GAELSLARRL SEQGSQQART RALAETIGVD LEDLAALRVE CFDISHTAGE ATQASCVVFH SHAMQNGEYR RYNIQDIIPG DDYAAMRQVL TRRYQKVVEQ AAEDAPDMPR VVLIDGGKGQ VEVARQVFEE LGLDIGLLVG VAKGEGRKVG LETLVFADGR PSLELGQGSA ALMLVAQIRD EAHRFAITGM RAKRAKARNT SRLEEIEGIG AKRRQRLLAR FGGLRGVMAA SVEELATVEG ISQTLAEEIY RQLH
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