| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1069 |
|---|
| Symbol | efp |
|---|
| ID | 1219878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 1121490 |
|---|
| End bp | 1122056 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637237432 |
|---|
| Product | elongation factor P |
|---|
| Protein accession | NP_519190 |
|---|
| Protein GI | 17545788 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0510953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.169109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTGA AAATCGCGCA AGAACTCCGC GCTGGTAACG TTTTCATGAT CGGCAACGAC
CCGATGGTCG TGCTCAAGAC CGAATACAGC CGCTCCGGCC GCAACGCCGC TGTCGTCAAG
ATGAAGTACA AGAACCTGCT GACCGGCGCG CCGTCGGAAT CGGTGTTCAA GGCCGACGAC
AAGATGGACC AGATCATCCT CGACAAGAAG GAGTGCACCT ACTCCTACTT CGCCGATCCG
ATGTACGTGT TCATGGACAC CGACTACAAC CAGTACGAAG TGGAAGCCGA CAGCATGGGC
GACGCGATCC ACTACCTGGA AGACGGCATG GCCGCCGAAG TGACCTTCTA CAACGAGAAG
GCCATCTCGG TCGAACTGCC GACCACGCTG GTCCGCGAAA TCGAATACAC CGAGCCGGCC
GTCAAGGGCG ACACCTCGTC GGGCAAGGTG CTGAAGATGG CCAAGATCAA GGGCGGCTTC
GAGATCCAGG TCCCGCTGTT CTGCAGCACC GGCGACAAGA TCGAAATCGA CACCCGTACG
CACGAGTACC GCAGCCGCGC CAACTGA
|
|---|
| Protein sequence | MALKIAQELR AGNVFMIGND PMVVLKTEYS RSGRNAAVVK MKYKNLLTGA PSESVFKADD
KMDQIILDKK ECTYSYFADP MYVFMDTDYN QYEVEADSMG DAIHYLEDGM AAEVTFYNEK
AISVELPTTL VREIEYTEPA VKGDTSSGKV LKMAKIKGGF EIQVPLFCST GDKIEIDTRT
HEYRSRAN
|
|---|
| |