| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1064 |
|---|
| Symbol | era |
|---|
| ID | 1219873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1117363 |
|---|
| End bp | 1118259 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637237427 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | NP_519185 |
|---|
| Protein GI | 17545783 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0212543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0907756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGAGG GGTTCCGCTG CGGCATGGTC GCCATCGTCG GGCGGCCGAA CGTCGGCAAG
TCCACGCTGA TGAACGCCCT GGTGGGCCAG AAAGTCAGCA TCACGTCGCG CAAGGCGCAG
ACTACGCGCC ATCGCATCAC CGGCATCCAG ACCACCGACG ATGCGCAGTT CGTCTTCGTC
GATACGCCGG GCTTCCAGAC ACGGCATGCC ACCGCGCTCA ACCGCTCGCT GAACCGCGCC
GTCACGTCGA CCCTGACGTC GGTCGACGCG GTGCTGTTCG TGGTCGAGGC CGGGCGCTAC
GGTCCGGACG ATGCGAAGGT CCTGTCGCTG CTGCCGCGCG AGACGCCCGT GATCCTGATC
GTCAACAAGG TCGACCGGCT CGATGCGTAC ACGCGCGCCG AGATGGTCGC CGTGTTCCTG
CAGGAGATGG CGCAAGTGTT TCCGTTCAAG GAAATCGTGC CAATGTCGGC CAAGAACCGG
GACGACATCC TGCGGCTGCT CGGCATCGTC CGGCCGTACC TGCCCGAAGG CGAGCCGATG
TATGACCCGG AGGCTCTGAC GGACCGCAGC GAGCGGTTCC TGGCCGCCGA GATCGTCCGC
GAGAAGGTGT TCCGCTGGAC GGGCGACGAG TTGCCGTATT CGAGCACCGT CGTGGTCGAC
AAGTTCGAGA CCGAGGGCCG CCTGCGGCGC GTGTTCGTCA CCATCCTGGT GGATCGCGAC
GCGCACAAGG CGATGATCAT CGGTGCCAAG GGCGCCAAGC TCAAGCAGAT CTCCACCGAA
GCCCGCATGG ACATGGAAAA GCTGTTCGAC GGCAAGGTCT ACCTGGAGGT CTGGGTCAAG
GTCAAGAGCG GCTGGGCCGA CAACGAGGCC GGTCTGCGCG CCTACGGCTA CGAATAG
|
|---|
| Protein sequence | MPEGFRCGMV AIVGRPNVGK STLMNALVGQ KVSITSRKAQ TTRHRITGIQ TTDDAQFVFV
DTPGFQTRHA TALNRSLNRA VTSTLTSVDA VLFVVEAGRY GPDDAKVLSL LPRETPVILI
VNKVDRLDAY TRAEMVAVFL QEMAQVFPFK EIVPMSAKNR DDILRLLGIV RPYLPEGEPM
YDPEALTDRS ERFLAAEIVR EKVFRWTGDE LPYSSTVVVD KFETEGRLRR VFVTILVDRD
AHKAMIIGAK GAKLKQISTE ARMDMEKLFD GKVYLEVWVK VKSGWADNEA GLRAYGYE
|
|---|
| |