Gene RSc1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1052 
SymbolfabG 
ID1219861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1105682 
End bp1106431 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID637237415 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionNP_519173 
Protein GI17545771 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.595942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CATTGAACAA CCAGGTCGCT CTCGTCACCG GCGCATCGCG CGGCATCGGC 
CGGGCGATCG CCCTGGAGCT GGCGCGCCAG GGGGCCACCG TGGTCGGCAC GGCCACCTCC
GAGGCAGGCG CCCAGGCGAT TTCCGCCTAC TTTGCCGAAG CGGGTGTCAA GGGCGCCGGG
GTGGTGCTCA ACGTCAACGA TGCGGCGCGC TGCGAAGCCG TGATCGACGA AGCCATCAAG
ACACACGGCG GCCTGAATAT CCTCGTGAAC AATGCCGGCA TCACCCAGGA CAACCTGGCG
ATGCGCATGA AGGACGACGA ATGGATGGCC GTCATCGACA CCAACCTGAG CGCCGTTTTC
CGCTTGTCCC GCGCCGTGCT GCGTCCGATG ATGAAGGCGC GTGGCGGTCG TATCATCAAC
ATCACCTCGG TGGTGGGCTC GGCCGGCAAC CCGGGCCAGG CCAACTATGC GGCCGCCAAG
GCGGGCGTGG AAGGCATGGC ACGGGCGATG GCCAAGGAAA TCGGCAGCCG TAACATCACG
GTCAACAGCG TTGCGCCCGG TTTCATCGAT ACCGACATGA CGAAGGTGCT GTCGGACGAG
CAGCATACCG CGCTGAAGGC GCAGATTCCG CTCGGCCGCC TGGGCATGCC GGAAGACATT
GCCAATGCGG TTGCTTTTCT GGCGTCACCG GCGGCGGGCT ACATCACGGG CGCGACGCTG
CACGTCAACG GCGGCATGTA CATGGGATAA
 
Protein sequence
MTQALNNQVA LVTGASRGIG RAIALELARQ GATVVGTATS EAGAQAISAY FAEAGVKGAG 
VVLNVNDAAR CEAVIDEAIK THGGLNILVN NAGITQDNLA MRMKDDEWMA VIDTNLSAVF
RLSRAVLRPM MKARGGRIIN ITSVVGSAGN PGQANYAAAK AGVEGMARAM AKEIGSRNIT
VNSVAPGFID TDMTKVLSDE QHTALKAQIP LGRLGMPEDI ANAVAFLASP AAGYITGATL
HVNGGMYMG