Gene RSc1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1045 
Symbol 
ID1219854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1100058 
End bp1100789 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID637237408 
Producthypothetical protein 
Protein accessionNP_519166 
Protein GI17545764 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA CGCTCTACCT GATCCCCAAC ACGCTCGGCC TGCGCGACGC CGACGATCCG 
CTGCCGGAGG TGATTCCCGC CGGCGTCCAA CAGATCACCG CGCGGCTCGA CTACTTTGTC
GCCGAGCACG CCAAGACGGC GCGCGCCCTG CTGAAGAAGC TGGCCGAAAC CGCGCCGCTG
ACGCACGCAC TGCAGGACAT CACGATCCGT GAGCTCAACG TCAAGACGCC GGAATCGGAG
CTGGAAGCCC TGTTGGCACC AGTGGTCGGC GGGCGCGATG GCGGACTGAT GTCGGAGGCC
GGCGTGCCCG CGGTGGCCGA CCCCGGGGCG AACCTGGTGC GGCTGGCGCA TCGGCACGGC
GTGCGCGTGA AACCGCTGGT GGGACCGAGC TCGATCCTGC TGGCAGTGAT GGCTTCCGGC
CTGAACGGCC AGAGCTTCGC GTTCAACGGC TATCTGCCCG TCGATGCAGG CGAACGTGTA
CGCAAGCTGC GCGCGCTGGA GCAGGCGTCG CGCGCGGCGG GGCAGACCCA GGTGTTCATC
GAGACGCCCT ACCGCAACGG CGCACTGCTG GAGGCGATCC AGGCAGCCTG CTCGCCGGGC
ACGCTGCTTT CGGTGGCGGT GGACCTGACG CTGCCCAGCG AGCAGGTGGT GACCCTGCCG
GTGGGCGATT GGCGCCCGGA TCGGCTGGCC CTGCACAAGC GGCCGGCCAT CTTCTCGCTG
CTGGCGCGCT GA
 
Protein sequence
MAGTLYLIPN TLGLRDADDP LPEVIPAGVQ QITARLDYFV AEHAKTARAL LKKLAETAPL 
THALQDITIR ELNVKTPESE LEALLAPVVG GRDGGLMSEA GVPAVADPGA NLVRLAHRHG
VRVKPLVGPS SILLAVMASG LNGQSFAFNG YLPVDAGERV RKLRALEQAS RAAGQTQVFI
ETPYRNGALL EAIQAACSPG TLLSVAVDLT LPSEQVVTLP VGDWRPDRLA LHKRPAIFSL
LAR