Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1045 |
Symbol | |
ID | 1219854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1100058 |
End bp | 1100789 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237408 |
Product | hypothetical protein |
Protein accession | NP_519166 |
Protein GI | 17545764 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCA CGCTCTACCT GATCCCCAAC ACGCTCGGCC TGCGCGACGC CGACGATCCG CTGCCGGAGG TGATTCCCGC CGGCGTCCAA CAGATCACCG CGCGGCTCGA CTACTTTGTC GCCGAGCACG CCAAGACGGC GCGCGCCCTG CTGAAGAAGC TGGCCGAAAC CGCGCCGCTG ACGCACGCAC TGCAGGACAT CACGATCCGT GAGCTCAACG TCAAGACGCC GGAATCGGAG CTGGAAGCCC TGTTGGCACC AGTGGTCGGC GGGCGCGATG GCGGACTGAT GTCGGAGGCC GGCGTGCCCG CGGTGGCCGA CCCCGGGGCG AACCTGGTGC GGCTGGCGCA TCGGCACGGC GTGCGCGTGA AACCGCTGGT GGGACCGAGC TCGATCCTGC TGGCAGTGAT GGCTTCCGGC CTGAACGGCC AGAGCTTCGC GTTCAACGGC TATCTGCCCG TCGATGCAGG CGAACGTGTA CGCAAGCTGC GCGCGCTGGA GCAGGCGTCG CGCGCGGCGG GGCAGACCCA GGTGTTCATC GAGACGCCCT ACCGCAACGG CGCACTGCTG GAGGCGATCC AGGCAGCCTG CTCGCCGGGC ACGCTGCTTT CGGTGGCGGT GGACCTGACG CTGCCCAGCG AGCAGGTGGT GACCCTGCCG GTGGGCGATT GGCGCCCGGA TCGGCTGGCC CTGCACAAGC GGCCGGCCAT CTTCTCGCTG CTGGCGCGCT GA
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Protein sequence | MAGTLYLIPN TLGLRDADDP LPEVIPAGVQ QITARLDYFV AEHAKTARAL LKKLAETAPL THALQDITIR ELNVKTPESE LEALLAPVVG GRDGGLMSEA GVPAVADPGA NLVRLAHRHG VRVKPLVGPS SILLAVMASG LNGQSFAFNG YLPVDAGERV RKLRALEQAS RAAGQTQVFI ETPYRNGALL EAIQAACSPG TLLSVAVDLT LPSEQVVTLP VGDWRPDRLA LHKRPAIFSL LAR
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