Gene RSc1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1041 
SymbolrluC 
ID1219850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1096833 
End bp1097828 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content67% 
IMG OID637237404 
Productribosomal large subunit pseudouridine synthase C protein 
Protein accessionNP_519162 
Protein GI17545760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.017285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAGG CACTCGACGG CAAATCGGTC GCCTACGTTG AAATCGGCGA AGACGCGCAA 
GGGCAGCGGA TCGACAACTT TCTGATGCGC TTGGCCAAGG GCGTGCCCAA GAGCCACATT
TACCGCATCC TGCGCTCCGG CGAGGTGCGC GTGAACAAGG GCCGCATCGA CGCGGAATAC
CGTCTGAACC TCGGCGATCT GGTGCGCATC CCGCCGCTGC GCATCGCCCA GCAATCGCCC
GGGCAGGCCG AGGCAGCGCG TGCCGTGCCG GCCGCCGAAT TCACGATTCT CCACGAAGAT
ACGCACCTGC TGGTGATCGA CAAGCCGGCC GGCGTGGCCG TGCATGGCGG TTCCGGCGTG
GCGTTCGGTG TCATCGAGCA GCTGCGCCGG TCGCGTCCGG AAGCGAAGTT CCTCGAACTG
GTGCACCGGC TGGATCGCGA GACCTCCGGC GTGCTGCTGC TGGCCAAGAA GCGCTCGGCG
CTGGTTGCGC TGCACGAGCA GATCCGCGAA GGCCAGCTGG ACAAGCGTTA CTTTGCTGCC
GTCAAGGGCG TCTGGCCGCA TCAGCGCCAG CACATCAAGG CCCCGCTGTT CAAATACAGC
ACGCCGGAAG GCGAGCGGCG CGTGCGCGTG CAGGCCGACG GGCAGCCGTC GCACACGGTG
TTCAACAGGG TGGGGGTGTT CGGCCCCTAC ACGCTGCTGG AGGCCGAGCT GAAGACCGGC
CGCACGCACC AGATCCGCGT GCACCTCGCG CACGCCGGCT TCCCGATTCT CGGCGACGAC
AAATACGGCG ATTTCGCGCT CAACAAGGCG CTGTCGCGCG CGAATGCGTC GCCACGGCTG
GCCCGCATGT TCCTGCATGC GCACACGCTG CGGCTGACCC ATCCGCAGAG TGGTGAAATC
GTGACCTTCA AGGCACCGCT GCCGGCCGAG TGTGCCGCGT TCCTCAACGC GTTCTCCCCG
CAGGATCCCG ATTCCGATGC CGCAGCAGCG CTTTGA
 
Protein sequence
MREALDGKSV AYVEIGEDAQ GQRIDNFLMR LAKGVPKSHI YRILRSGEVR VNKGRIDAEY 
RLNLGDLVRI PPLRIAQQSP GQAEAARAVP AAEFTILHED THLLVIDKPA GVAVHGGSGV
AFGVIEQLRR SRPEAKFLEL VHRLDRETSG VLLLAKKRSA LVALHEQIRE GQLDKRYFAA
VKGVWPHQRQ HIKAPLFKYS TPEGERRVRV QADGQPSHTV FNRVGVFGPY TLLEAELKTG
RTHQIRVHLA HAGFPILGDD KYGDFALNKA LSRANASPRL ARMFLHAHTL RLTHPQSGEI
VTFKAPLPAE CAAFLNAFSP QDPDSDAAAA L