| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1035 |
|---|
| Symbol | |
|---|
| ID | 1219844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1087851 |
|---|
| End bp | 1089224 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637237398 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519156 |
|---|
| Protein GI | 17545754 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.371122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGA TGCTGGCGGC GCTGCGCGAT GAGCTGGCGC GCGGCAACGA GCGCATCGAG
CGCGAGCTGC GCGGCGCGAT CGGCGAGACC GCGCGCATCG GCCGCAGCGA CGTCTCGCAG
CAGCTCGGGC AGTTCCAGCA GGTGCTGGCC ACGCAACTGA CCAGCGTCGC CACGGTGCAG
AACAACCAGA TCGACACCTT CGCCCAGCAG TTGACCAAGC TGACCGAGTC GAACACGCAG
CAACTGGAGG CCGTGCGCCA GAACCTGCAG CAGCAGGCCC TGCAGGCCCG CGAAGAACAG
GCCGGCGCGC TGCGCCGCTT CGGCGAGACC ATGCAGCAGC AACTGGCGCA GCTGGCCGAC
GGCAACGAGC GGCGGCTGGC CGAAGTGCGC GCCACGCTGG AGCAGAAGCT CAAGGACATC
GAGGCCAACA ACGCGACCAA GCTCGACGAG ATGCGGCGCA CCGTCGACGA GAAGCTGCAT
GCCACGCTGG AGCAGCGCCT GGGCGAGTCG TTCAAGCTGG TGTCCGACCG GCTGGAGCAG
GTGCATCGCG GCCTGGGCGA AATGCAGGCG CTGGCGCAGG GCGTCGGCGA CCTGAAGAAG
GTGCTGACCA ACGTGAAGAC GCGCGGCACC TGGGGCGAAG TCCAGCTCGA GATGCTGCTG
GAGCAGATGC TGACACCCGA GCAGTACGAC AAGAACGTCG AGACCGTGCG CGGCACCGGC
GCGCGGGTCG AGTTCGCCAT CCGCCTGCCC GGCAAGACCG ATGCGGACCG CGAGGCGACT
GTCTGGCTGC CGATCGATGC CAAGTTCCCC AAGGAACAGT ACGAGCGTCT GCTCGATGCG
CAGGAGCGCG CGGACGCGGA GGGCGCCGCC GTGGCCAGCC GCGAGCTGGA GGCGGCCGTG
CGCAAGGAAG CGCAGACCAT TCACGAGAAG TACATTGCGC CGCCGGCCAC CACCGACTTC
GCCATCCTGT TCCTGCCGAC CGAGGGTCTC TATGCCGAGG TGCTGCGCCG CCCCGGCCTG
ACCGACGAGC TGCAGCGCAA GTTCCGCGTG ACGGTGGCCG GGCCGACCAC GCTGACGGCC
ATCCTCAACA GCCTGCAGAT GGGCTTCCGC ACGCTGGCGC TGGAGAAGCG CTCCAGCGAG
GTCTGGCAGG TGCTGGGCGC GGTCAAGAGC GAGTTCGGCA AGTTCGGCGA CGTGCTGGCC
GCGACCAAGA AGACGCTGGA GCGCGCGGTC AGCAACATCG AGCAGGCCGA AGTCCGCACG
CGCCAGATGA ACCGCAAGCT CAAGGCGGTG GAAGCCCTGC CGAGCGATTC CGCGCAGACG
CTGCTGGGGC TGGAGACGGC GCCGTTGCAG GACGACGCAG CCGAGGCGGA TTGA
|
|---|
| Protein sequence | MAPMLAALRD ELARGNERIE RELRGAIGET ARIGRSDVSQ QLGQFQQVLA TQLTSVATVQ
NNQIDTFAQQ LTKLTESNTQ QLEAVRQNLQ QQALQAREEQ AGALRRFGET MQQQLAQLAD
GNERRLAEVR ATLEQKLKDI EANNATKLDE MRRTVDEKLH ATLEQRLGES FKLVSDRLEQ
VHRGLGEMQA LAQGVGDLKK VLTNVKTRGT WGEVQLEMLL EQMLTPEQYD KNVETVRGTG
ARVEFAIRLP GKTDADREAT VWLPIDAKFP KEQYERLLDA QERADAEGAA VASRELEAAV
RKEAQTIHEK YIAPPATTDF AILFLPTEGL YAEVLRRPGL TDELQRKFRV TVAGPTTLTA
ILNSLQMGFR TLALEKRSSE VWQVLGAVKS EFGKFGDVLA ATKKTLERAV SNIEQAEVRT
RQMNRKLKAV EALPSDSAQT LLGLETAPLQ DDAAEAD
|
|---|
| |