| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1029 |
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| Symbol | |
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| ID | 1219838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1081177 |
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| End bp | 1081917 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637237392 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_519150 |
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| Protein GI | 17545748 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.264626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA CGTCCCTGTT CATCCTGACC GGCGCCTCGC GCGGGCTGGG CGCCGCGCTG
GCCGAAGCGC TGCTGCAGCC GGGCCATCGC CTGGTCTGCG TGGCGCGCGG CGACAACCCG
GCGCTGCGCG CCCAGGCCGA ACGTGCCGGC GTGACGCTGG ACTGGCACCA ATGCGACCTC
GCCGACGCGC GCGCCGCCGA AGCCTGGATG GCACGCACGC TGGCCGCCCT GCCCGAACAC
AAGCGGGTGG CGCTGGTGCT CAATGCCGGC GTGGTCGAGC CGATCGGCGC GATCCAGACG
CTGCATGCCG ATGCGCTGCT GCCGCACCTG CACCTGAACC TGGCCGGCCC GATGGCCATG
ACCGCCGCCC TGCTGCGCGG CACCGCCGGC TGGGGCGCGC AGCGCCGCAT CCTGGCGGTG
TCCTCGGGCG CGGCGCGCCG GCCCGTTGCC GGCTGGGCCG CGTATTGCAC CGGCAAGGCG
GGCCTGGACA TGTTCGTGCG CGCCATCAAT GCCGAGGGCG ACGCCAGCAC GCGCGCCGTG
GCGCTGGCCC CGGGCGTGCT CGACACCGAC ATGCAGCGCA CCATCCGCAG CACCGACTTC
GCCGGCGTGC AGCGCTTCCG CGATCTGCAC GCACACGGCG AGCTGGTCTC GCCGCAGGAC
GCCGCCCGGC GCATCGTCGC CTACCTCGCC CGGCCGGATT TCGGCGCGAC CGAACTCGAC
GATCTGCGCA ACATCGCCTG A
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| Protein sequence | MADTSLFILT GASRGLGAAL AEALLQPGHR LVCVARGDNP ALRAQAERAG VTLDWHQCDL
ADARAAEAWM ARTLAALPEH KRVALVLNAG VVEPIGAIQT LHADALLPHL HLNLAGPMAM
TAALLRGTAG WGAQRRILAV SSGAARRPVA GWAAYCTGKA GLDMFVRAIN AEGDASTRAV
ALAPGVLDTD MQRTIRSTDF AGVQRFRDLH AHGELVSPQD AARRIVAYLA RPDFGATELD
DLRNIA
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