| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1028 |
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| Symbol | lysS |
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| ID | 1219837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1079620 |
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| End bp | 1081152 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237391 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | NP_519149 |
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| Protein GI | 17545747 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.296051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.894371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CGAACACCCC GGCCGCACCC ACTGGACAGG CGCAAGACGA CAACCAGATC
ATGGCCGAGC GCCGCGAGAA GCTCGCCGCG CTGCGCCAGC AGGGCGTCGC CTATCCCAAC
GATTTCTGCC CGACCCACCA CGCGGCCGAC CTGCACACCC GCTACAGCGA GACCGACCAG
CCCGCGCTGG AAGCGGCCAA TGTCGAGGTC GCCCTCGCCG GGCGCATGAT GCTCAAGCGC
GTGATGGGCA AGGCCAGCTT CGCCACCGTG CAGGACGGCA GCGGCCAGAT CCAGTTCTAC
ATCACGCGCG ACCGCGTGGG CGAAGACGTC TACGCCGCCT TCAAGCATTG GGACCTCGGC
GACATCGTCG CCGCGCGCGG CGTGCTGTTC CGCACCAACA AGGGCGAGCT GTCGGTGCAG
GTGCAGGAGC TGCGCCTGCT GTCGAAGTCG CTGCGTCCGC TGCCGGACAA GTTCCACGGC
CTGGCCGACC AGGAAATGAA GTACCGCCAG CGCTACGTTG ACCTGATCGT CTCGCCCGAG
ACGCGCAACA CCTTCCGCGC CCGCACCAAG GCCATCGCCT CGCTGCGCCA CCACATGAGC
GATGCCGGCT TCATGGAAGT GGAAACGCCG ATGCTGCACC CGATTCCGGG CGGCGCGGCG
GCCAAGCCCT TCATCACGCA CCACAACGCG CTGGACATGC AGATGTTCCT GCGCATCGCC
CCGGAGCTGT ACCTCAAGCG CCTGATCGTC GGCGGCTTCG AGCGCGTGTA CGAGATCAAC
CGCAACTTCC GCAACGAGGG CGTGTCGCCA CGGCACAACC CCGAGTTCAC GATGATGGAG
TTCTATGCAG CCTACACGGA CTACCGCTGG CTGATGGACT ACACCGAGAA CCTGATCCGC
CAGGCCGCCA TCGATGCCAC CGGCAGCGCC GCCCTCAACT ACCAGGGTCG CGAGCTGGAC
CTGTCCAAGC CCTTCCACCG CCTGACCATC TGCCAGGCCA TCCAGAAGTA CGCGCCGCAG
TACACCGACG CGCAACTGGC CGACGCCAAC TTCCTGCGTG CCGAGCTCAA GAAGTTCAAG
ATCGACACCA ACGCGCCGCA GTTCCTGAAC GCCGGCGTGG GCACGCTGCA GCTCGTCCTG
TTCGAAGAGA CGGCCGAGTC GCAACTGTGG GAGCCGACCT TCATCGTCGA CTACCCGGTC
GAGGTGTCGC CGCTGGCACG CGGCTCGGAC ACGCTGCCCG GCATCACCGA GCGCTTCGAG
CTGTTCATCA CCGGCCGCGA GATCGCCAAC GGCTTCTCCG AGCTGAACGA CCCCGAAGAC
CAGGCCGAAC GCTTCCGCAA GCAGGTCGAA CAGAAGGACG CCGGCGACGA GGAAGCCATG
TTCTACGATG CCGACTACAT CCGCGCGCTG GAATACGGCA TGCCCCCGAC CGGCGGCTGC
GGCATCGGCA TCGACCGCCT GGTGATGCTG CTGACCGACA GCCCCAACAT CCGCGACGTG
ATCCTCTTCC CGCACCTGCG CCGCGAAGAC TGA
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| Protein sequence | MTEPNTPAAP TGQAQDDNQI MAERREKLAA LRQQGVAYPN DFCPTHHAAD LHTRYSETDQ
PALEAANVEV ALAGRMMLKR VMGKASFATV QDGSGQIQFY ITRDRVGEDV YAAFKHWDLG
DIVAARGVLF RTNKGELSVQ VQELRLLSKS LRPLPDKFHG LADQEMKYRQ RYVDLIVSPE
TRNTFRARTK AIASLRHHMS DAGFMEVETP MLHPIPGGAA AKPFITHHNA LDMQMFLRIA
PELYLKRLIV GGFERVYEIN RNFRNEGVSP RHNPEFTMME FYAAYTDYRW LMDYTENLIR
QAAIDATGSA ALNYQGRELD LSKPFHRLTI CQAIQKYAPQ YTDAQLADAN FLRAELKKFK
IDTNAPQFLN AGVGTLQLVL FEETAESQLW EPTFIVDYPV EVSPLARGSD TLPGITERFE
LFITGREIAN GFSELNDPED QAERFRKQVE QKDAGDEEAM FYDADYIRAL EYGMPPTGGC
GIGIDRLVML LTDSPNIRDV ILFPHLRRED
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