Gene RSc1024 details

Gene Information

• Locus tag: RSc1024
• Symbol: hscA
• ID: 1219833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1075903
• End bp: 1077768
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637237387
• Product: chaperone protein HscA
• Protein accession: NP_519145
• Protein GI: 17545743
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.662352
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.182467
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTTTAC TCCAGATTTC CGAACCCGGC GAATCGCCCG CGCCGCACCA GCGCCGCCTG 
GCGGTCGGCA TCGACCTGGG CACGACCAAC TCGCTGGTCG CCGCGGTGCG CAGCAGTGTG 
CCGGAAGTGC TGCCCGACGA GCAGGGCCGG CCGCTGCTGC CTTCGGTGGT GCGCTATCTG 
CCGGCCGGCG GCGCGCAGAT CGGCTACAAG GCCCAGGTCG AGGCGGTGCG CGACCCGAAG 
AACACCATCG TCTCGGTCAA GCGTTTCATG GGGCGCGGGC TCAAGGACGT GGCCCACATC 
GAGAACACGC CGTACGACTT CGTCGACGCG CCCGGCATGG TGCAGCTCAA GACCGTGGCC 
GGCGTGAAGA GCCCGGTCGA GGTGTCGGCG GAGATTCTCG CCACGCTGCG CCAGCGCGCG 
GAAGACACGC TGGGCGATGA CCTGGTCGGC GCCGTCATCA CCGTGCCGGC GTACTTCGAC 
GATGCCCAGC GCCAGGCCAC CAAGGATGCC GCCAGGCTGG CCGGCCTGAA CGTGCTGCGC 
CTGCTGAACG AGCCGACCGC CGCCGCCATC GCCTATGGCC TCGACAACGC GGCCGAGGGT 
GTCTACGCGG TCTATGACCT GGGCGGCGGC ACGTTCGACA TCTCCGTCCT CAAGCTCACC 
AAGGGCGTGT TCGAGGTGAT GTCGACCGGC GGCGACTCGG CGCTCGGCGG CGACGATTTC 
GACCAGCGCA TCGCCTGCTG GATCGTCGAG CAGGCCGGCC TGCAGCCGCT GTCGGCCGAA 
GACATGCGCC TGCTGCTGAA CAAGGCCCGC GCGGCCAAGG AATGGCTGTC CGGCGCCGAC 
AGCACGGAGG TCGACGCGGT GCTCTCCACC GGCGAGACCG TCCACCTGGT GCTGACCGCC 
GAAACCTTCG CCGAACTGAC CGCCAACCTC GTGCAGAAAA CGCTGGCGCC GGTGCGCCGC 
GCGCTGCGCG ATGCCGGCGT GGCGGTCGAT GAGATCCAGG GCGTGGTGCT GGTGGGCGGC 
GCGACCCGCA TGCCGGTGAT CCGCCGTGCC GTCGCCCAGC TGTTCGGCCG CGCGCCGCTG 
ACCAACCTCG ATCCGGACCA GGTGGTGGCG ATCGGCGCCG CCATGCAGGC CAGCTTGCTG 
GCCGGCAACC GCGCGGCCGG TGACGACTGG CTGCTGCTCG ACGTGATCCC GCTGTCGCTG 
GGTGTCGAGA CCATGGGCGG CCTGGTCGAG AAGATCATCC CGCGCAACAG CACGATTCCG 
GTCGCGCGCG CGCAGGAGTT CACCACCTTC AAGGATGGCC AGACAGCCAT GGCGATCCAC 
GTGCTGCAGG GCGAGCGCGA ACTGGCGGGC GACTGCCGCT CGCTGGCGCG CTTCGAGCTG 
CGCGGCATCC CGCCGATGGT GGCGGGCGCC GCGCGCATTC GCGTGACATA CCAGGTGGAT 
GCCGACGGCC TGCTGTCGGT GTCGGCGCGC GAGACGGTGT CGGGCGTGGA GGCCTCCATC 
GCGGTCAAGC CGTCCTACGG CCTGGGCGAT GACGATATCG CCCGCATGCT GCAGGAGGGC 
TTCCAGTCCG CCGAGGAAGA CATGCGCCGC CGCGCGCTGG CCGAGGAGCG TGTCGAAGGC 
GAGCGGCTGC TGGAGGCCCT GTCGCACGCG CTGGACGCCG ACGGCGACCT GCTTTCCGCC 
GACGAGCGCG CCGCCGTCGA CGCGCAGGTC GCCGCGCTGC GCGTCACCCT GCAGGGCGAG 
GATCACCGCG CCATCAAGGA TGCCGTCGAC GCGCTGTCGC ACGGCACGGA CGAGTTCGCC 
GCCCGCCGCA TGGACCGCGG CATCCGCGCG GCGCTGGCCG GCAAACGCAT CGAGGAGCTC 
GGCTGA 

 

Protein sequence

MALLQISEPG ESPAPHQRRL AVGIDLGTTN SLVAAVRSSV PEVLPDEQGR PLLPSVVRYL 
PAGGAQIGYK AQVEAVRDPK NTIVSVKRFM GRGLKDVAHI ENTPYDFVDA PGMVQLKTVA 
GVKSPVEVSA EILATLRQRA EDTLGDDLVG AVITVPAYFD DAQRQATKDA ARLAGLNVLR 
LLNEPTAAAI AYGLDNAAEG VYAVYDLGGG TFDISVLKLT KGVFEVMSTG GDSALGGDDF 
DQRIACWIVE QAGLQPLSAE DMRLLLNKAR AAKEWLSGAD STEVDAVLST GETVHLVLTA 
ETFAELTANL VQKTLAPVRR ALRDAGVAVD EIQGVVLVGG ATRMPVIRRA VAQLFGRAPL 
TNLDPDQVVA IGAAMQASLL AGNRAAGDDW LLLDVIPLSL GVETMGGLVE KIIPRNSTIP 
VARAQEFTTF KDGQTAMAIH VLQGERELAG DCRSLARFEL RGIPPMVAGA ARIRVTYQVD 
ADGLLSVSAR ETVSGVEASI AVKPSYGLGD DDIARMLQEG FQSAEEDMRR RALAEERVEG 
ERLLEALSHA LDADGDLLSA DERAAVDAQV AALRVTLQGE DHRAIKDAVD ALSHGTDEFA 
ARRMDRGIRA ALAGKRIEEL G