| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1011 |
|---|
| Symbol | uvrB |
|---|
| ID | 1219820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1061898 |
|---|
| End bp | 1063988 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637237374 |
|---|
| Product | excinuclease ABC subunit B |
|---|
| Protein accession | NP_519132 |
|---|
| Protein GI | 17545730 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.771852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.613992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TCAGCCAAGT CCCCAGCCCG TACGACGAGT CGAAGTTCGT CACATTCGAC
GGCTCGCCGT TCCAGCTGTA TCAGCCGTAT CCGCCCGCCG GCGACCAGCC CGAGGCGATC
CGCCAACTGG TCGAGGGTAT CGGTGACGGC CTGTCGTACC AGACGCTGCT GGGCGTGACG
GGCTCGGGCA AGACCTACAC GATGGCCAAC GTGATCGCAC AGGCGGGGCG GCCCGCGATC
GTGTTCGCGC CCAACAAGAC GTTGGCGGCG CAACTGTATT CGGAGTTCCG CGAGTTCTTC
CCGCGCAATG CGGTCGAGTA CTTCGTCTCG TACTACGACT ACTACCAGCC GGAAGCGTAC
GTGCCGCAGC GCGACCTGTT CATCGAGAAA GATTCGTCGG TCAACGAGCA TATCGAGCAG
ATGCGGCTGT CGGCCACCAA GAGCCTGCTG GAGCGCCGCG ACGTGGTGAT CGTGGCCACC
GTGTCGGCCA TCTACGGCAT CGGCAACCCG ACCGAATACC ACCAGATGAT CCTGACGCTG
CGCACTGGCG ACAAGATCAG CCAGCGCGAC GTGATCGCGC GCCTGATCGC CATGCAGTAC
ACGCGCAACG AGACGGACTT CCAGCGCGGC ACCTTCCGCG TGCGCGGCGA CACCGTCGAC
ATCTTTCCCG CCGAGCACGC CGAGATGGCG GTGCGGCTGG AGCTGTTCGA CGACGAGGTC
GATTCGCTGC AGCTGTTCGA TCCGCTCACC GGGCGCGTGC GGCAGAAGAT CCTGCGCTTC
ACGGTGTACC CGTCGAGCCA CTACGTGACG CCGCGCGAGA CCGTGCTGCG CGCCATCGGG
ACCATCAAGG CCGAGCTGCG CGAGCGGCTG GATTTCTTCT ACCAGGAGAA CAAGCTGGTC
GAGGCGCAGC GCCTGGAGCA GCGCACGCGC TTCGACCTGG AGATGCTGCA GGAGCTGGGC
TTCTGCAAGG GCATCGAGAA CTATTCGCGG CACCTGTCCG GCGCCCAGCC GGGCGAGCCG
CCTCCGACCC TGGTCGACTA CCTGCCGTCC GACGCGCTGA TGTTCCTGGA CGAGTCGCAC
GTGCTGATCG GCCAGCTCAA CGGCATGTAC AACGGCGACC GCGCGCGCAA GGAGACGCTG
TCCGCGTATG GCTTCCGCCT GCCGTCCGCG CTGGACAACC GGCCGCTGAA GTTTGCCGAG
TTCGAGGGCA AGATGCGGCA GGTGGTTTTC GTGTCCGCCA CGCCGGCCGA TTACGAGAAG
CAGCGCGCCG GCGACGAGGT GGTCGAGCAG GTGGTGCGGC CCACGGGCCT GGTCGATCCG
ATCATCCACG TGCGGCCGGC CACCACGCAG GTGGACGACC TGCTGTCGGA GATCCACGAG
CGCGTCAAGG CCGGCGAGCG CGTGCTGGTC ACCACGCTCA CCAAGCGCAT GGCCGAGCAG
CTGACCGAGT TCCTGTCGGA AAACGGCGTC AAGGTCCGCT ACCTGCACTC GGACATCGAC
ACCGTCGAGC GCGTGGAGAT CATCCGCGAC CTGCGGCTGG GCACCTTCGA CGTGCTGGTC
GGCATCAACC TGCTGCGCGA GGGGCTGGAC ATTCCCGAGG TGTCGCTGGT GGCCATCCTC
GACGCCGACA AGGAAGGCTT CCTGCGCGCC GAGCGCTCGC TGATCCAGAC CATCGGCCGC
GCCGCGCGCA ACGTCAACGG CACCGCCATC CTCTATGGGG ATCGCATCAC CGAGTCGATG
AAGAAGGCCA TTGGCGAGAC CGAGCGGCGA CGCGCCAAGC AGATCGCCCA CAACGAGGCC
CATGGCATCA CGCCGCGCGG CGTGGTCAAG CGCATCAAGG ACATCATTGA CGGCGTGTAC
AACGTCGACG ATGCGCGCGC GGAGCTGAAG GCCGCGCAGG ATGCCGCCAA GTACGAAGAC
ATGAGCGAGA AGCAGGTCGG CAAGGAAATC AAGCGTCTCG AAAAGCAGAT GCTCGACCAC
GCCAAGAACC TGGAATTCGA GAAGGCGGCC GCGGTGCGCG ACCAGTTGGC CAAGCTCAAG
TCGCAGGTCT TCGGGGCCAG CGGCGAAGAC CATATCGTGC CGGCGGCCTG A
|
|---|
| Protein sequence | MTDLSQVPSP YDESKFVTFD GSPFQLYQPY PPAGDQPEAI RQLVEGIGDG LSYQTLLGVT
GSGKTYTMAN VIAQAGRPAI VFAPNKTLAA QLYSEFREFF PRNAVEYFVS YYDYYQPEAY
VPQRDLFIEK DSSVNEHIEQ MRLSATKSLL ERRDVVIVAT VSAIYGIGNP TEYHQMILTL
RTGDKISQRD VIARLIAMQY TRNETDFQRG TFRVRGDTVD IFPAEHAEMA VRLELFDDEV
DSLQLFDPLT GRVRQKILRF TVYPSSHYVT PRETVLRAIG TIKAELRERL DFFYQENKLV
EAQRLEQRTR FDLEMLQELG FCKGIENYSR HLSGAQPGEP PPTLVDYLPS DALMFLDESH
VLIGQLNGMY NGDRARKETL SAYGFRLPSA LDNRPLKFAE FEGKMRQVVF VSATPADYEK
QRAGDEVVEQ VVRPTGLVDP IIHVRPATTQ VDDLLSEIHE RVKAGERVLV TTLTKRMAEQ
LTEFLSENGV KVRYLHSDID TVERVEIIRD LRLGTFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNVNGTAI LYGDRITESM KKAIGETERR RAKQIAHNEA
HGITPRGVVK RIKDIIDGVY NVDDARAELK AAQDAAKYED MSEKQVGKEI KRLEKQMLDH
AKNLEFEKAA AVRDQLAKLK SQVFGASGED HIVPAA
|
|---|
| |