Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1009 |
Symbol | tISRso1 |
ID | 1219818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1059517 |
End bp | 1060341 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237372 |
Product | ISRSO1-transposase protein |
Protein accession | NP_519130 |
Protein GI | 17545728 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.11795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.296125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGAAAA AAGAACATCG AGAGCGTGAG GCGAAGCTAG CTCGCAAGAC AAAGCGTTAC CCGAGCGACA TGACGGATAT CGAATGGGCC GCTGTGCAGC CGCTGCTGCC ACGCGCGGCC GTGCGTGGTC GGCGTCGGGA GTGCGACTTG AGGGAGGTGG TCAATGCCTT GCGCTATCTG GTGCGGGCGG GCTGCGGCTG GCGCATGCTG CCGCACGACT TTCCGCCGTG GCAGACCGTA TATTGGTGGT TTCGTCGGCT CATGCGCCGC TTCCTGTTCC GCACGCTGCA TGACGTGGTG CTGATGCTGG ACCGGGAGCT GGCTGGGAGG CAGCCGTGCC CGAGTGGGGG CGTCATCGAC AGCCAGACAG TCAAAGCACC CTCGGCCGAC AAGCGCGGCT ACGACGCCGC CAAGAAAGTC GTCGGGCGCA AGCGGCATAT CGCGGTGGAC ACGGATGGAC GACTGCTGAT GGTGAACCTG ACACCGGCGG ACATTGCCGA TAGCACCGGG GCGCTGGCGG TGCTGGAAGC GGTGAAGAAG CGCTGGCCGG GTATGGAACA CCTGTTTGCA GACGGCGCCT ACGACCGCAC GGCGCTGATG GACAAGGCAT CGGCCCTCGA CTTCGTGGTT GAGGTGGTGC GCCGGCACGA GCAGCAAACG GGCTTTGCCG TTCTGCCGCG CCGCTGGGTG GTCGAGCGCA CCTTTGGGTG GATGGTTCGC TGGCGCCGAC TTGTACGCGA CTACGAGCAG CGTGCGGACG TATCGGAAGC CATGATTCAT ATCGCGATGA GTGGCTTGTT ACTGCGCAGA ATCGCTCATC CTTGA
|
Protein sequence | MWKKEHRERE AKLARKTKRY PSDMTDIEWA AVQPLLPRAA VRGRRRECDL REVVNALRYL VRAGCGWRML PHDFPPWQTV YWWFRRLMRR FLFRTLHDVV LMLDRELAGR QPCPSGGVID SQTVKAPSAD KRGYDAAKKV VGRKRHIAVD TDGRLLMVNL TPADIADSTG ALAVLEAVKK RWPGMEHLFA DGAYDRTALM DKASALDFVV EVVRRHEQQT GFAVLPRRWV VERTFGWMVR WRRLVRDYEQ RADVSEAMIH IAMSGLLLRR IAHP
|
| |