| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1008 |
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| Symbol | phaZ |
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| ID | 1219817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1058015 |
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| End bp | 1059283 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637237371 |
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| Product | poly[D(-)-3-hydroxybutyrate] depolymerase protein |
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| Protein accession | NP_519129 |
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| Protein GI | 17545727 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0708481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.116581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTACC AGCTTCACGA ATTCCAGCGC GCCATGCTCA GCCCGATGAC GGCCTGGGCC
CAGGCAACCG CCAAGACCTT CACCAATCCG CTGAGCCCGC TGTCGCTGCT GCCCGGCGCG
CAGCGCTACG CCGCGGGCTA CGAACTGCTG TACCGGCTCG GCAAGGAATA CGAGAAGCCG
GAATTCAACA TCCGCTCGGT CAGGTCGAAC GGCCGCGACA TTCCCATCGT CGAGCAGACC
ATCATCGAGA AGCCGTTCTG CCGCCTGGTC CGCTTCAAGC GCTATGCCGA CGATGCGGAA
ACCATCCGCA TGCTCAAGGA CGAGCCGGTC GTCCTGGTGT GCGCGCCGCT GTCCGGCCAC
CACTCGACGC TGCTGCGCGA CACGGTGCGC ACGCTGCTGC AGGATCACAA GGTCTATGTG
ACGGACTGGC TCGACGCACG CATGGTGCCG GTCGGGGCGG GCCCCTTCCA CCTGTCCGAC
TACATCGCCT ACATCCGCGA ATTCATCGCG CACATCGGTG CCGACAAGCT GCATGTGATC
TCGGTGTGCC AGCCGACCGT GCCGGTGCTG GCGGCCATCT CGCTGATGGC ATCGGACGGC
GAGAAGACGC CGCTGACCAT GACGATGATG GGTGGCCCGA TCGACGCCCG CAAGAGCCCG
ACCGCCGTCA ACTCGCTGGC GACCAACAAG TCGCACGCAT GGTTCGAGAA CAATGTGATC
TACACCGTGC CGGCCAACTA TCCGGGACAC GGCCGCCGCG TCTACCCCGG CTTCCTGCAG
CACGCCGGCT TCGTGGCGAT GAATCCCGAC CGCCACGTCT CGTCGCATTA CGACTACTAC
CTGAGCCTGG TCGAGGGCGA TAAGGAAGAC GCCGAAGCCC ACGTGCGCTT CTACGACGAG
TACAACGCCG TGCTGGACAT GGCGGCCGAG TATTACCTGG ACACCATCCG CGACGTGTTC
CAGGAATTCC ACCTGGCCAA CGGCACCTGG GTGGTGGATG GCAAGCCGGT GCGCCCGCAG
GACATCAAGG GCACCGCGCT GTTCACCATC GAGGGCGAAC TGGACGACAT CTCGGGCAGC
GGCCAGACCG AGGCGGCGCA CGACTTGTGC AGCAGCATCC CGAAGACGCG CAAGCAGCAC
CTGACCGCGT CCAACTGCGG CCATTACGGC ATCTTCTCGG GTCGGCGCTG GCGCGAGTTC
GTGTATCCGC AGCTGCGCGA CTTCATCCGC CGCTACGACA GCAGCACGCG CATCAAGGCG
GTCGCCTGA
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| Protein sequence | MLYQLHEFQR AMLSPMTAWA QATAKTFTNP LSPLSLLPGA QRYAAGYELL YRLGKEYEKP
EFNIRSVRSN GRDIPIVEQT IIEKPFCRLV RFKRYADDAE TIRMLKDEPV VLVCAPLSGH
HSTLLRDTVR TLLQDHKVYV TDWLDARMVP VGAGPFHLSD YIAYIREFIA HIGADKLHVI
SVCQPTVPVL AAISLMASDG EKTPLTMTMM GGPIDARKSP TAVNSLATNK SHAWFENNVI
YTVPANYPGH GRRVYPGFLQ HAGFVAMNPD RHVSSHYDYY LSLVEGDKED AEAHVRFYDE
YNAVLDMAAE YYLDTIRDVF QEFHLANGTW VVDGKPVRPQ DIKGTALFTI EGELDDISGS
GQTEAAHDLC SSIPKTRKQH LTASNCGHYG IFSGRRWREF VYPQLRDFIR RYDSSTRIKA
VA
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