| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0999 |
|---|
| Symbol | |
|---|
| ID | 1219808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1050199 |
|---|
| End bp | 1050546 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637237362 |
|---|
| Product | putative periplasmic cytochrome type-c oxidoreductase signal peptide protein |
|---|
| Protein accession | NP_519120 |
|---|
| Protein GI | 17545718 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.209116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TCCTCACGAT GGTGGCATTG GGCGCGTTGG CCGCGTCGGC ATCTGCTGCC
GATATCCAGG GCAATGCGCA GGCGGGCGCC GGCAAGGTGG CCATGTGCAT CGGCTGTCAT
GCGATTCCGG ACTACCGGGC GTCGTATCCC GAGGTGTATC GCGTGCCCTA CCTGGGCGGA
CAGAACGCCA AATACATCGA AAGCGCCCTC AACGCCTACA AGAAGGGCGA GCGCAAGCAC
CCGACCATGC GCGGCATCGC AGGCTCGCTG AGCGACCAGG ACATCGCCGA TCTGGCGGCC
TACTACTCGC AGCAGACCGC CGCCACGCCC AACAACCCCC GGAAGTGA
|
|---|
| Protein sequence | MKKILTMVAL GALAASASAA DIQGNAQAGA GKVAMCIGCH AIPDYRASYP EVYRVPYLGG
QNAKYIESAL NAYKKGERKH PTMRGIAGSL SDQDIADLAA YYSQQTAATP NNPRK
|
|---|
| |