| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0985 |
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| Symbol | |
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| ID | 1219794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1036110 |
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| End bp | 1037330 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237348 |
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| Product | aminotransferase protein |
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| Protein accession | NP_519106 |
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| Protein GI | 17545704 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0572002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.184063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTCT CCACACTGAA GGACCATACC ATGGACCACC CCGCCTGCAC CTTCTCCCGC
CGCGCGCAAC AGCTGACCAG CTCGGCGATC CGGGAAATCC TCAAGATCAC CGAGCGCCCC
GAGGTGATCT CGTTCGCCGG CGGCCTGCCT TCGCCGGTGA CCTTCCCGGT CGAGGCGATC
CAGGCGGCGT GCGCCCGCAT GTTCGCGGAC AATCCGCAGG CGTCGCTGCA GTACACCCCG
ACCGAAGGCC TGTCGATGCT GCGCGAGTGG ATCGCCCAGC GCCACGGCAC CACCGCGTCG
CGCGTGCTGA TCACCACCGG CTCGCAACAG GGCCTGGACC TGCTGGGCAA GATCTTCATC
GACCCGCAGA GCAAAGTGCT GGTCGAAACG CCGACCTACC TCGGCGCGCT GCAGGCGTTC
TCGCTGTTCG AGCCGAGCTA CGCCTCGGTG CCGACCGATG AGCGCGGCCT GCTGCCCGAA
GCGCTCACGC CCGAACTCAC CGCCGGCGCG CGCTTCTTCT ACACCATCCC GAACTTCCAG
AACCCGACCG GCCGCCGCCT GCCGCTCGAG CGCCGCCAGG CCCTGGTGGC CCGCGCGAAA
GAACTCGGCG TGCTGCTGGT CGAAGACGAT CCGTACGGCG AGCTGAGCTA TACCGGCGAT
GCCCTGCCGT CGCTGCGCTC GCTCAATCCG GACGGCGTGG TCTACATGGG CTCGTTCTCG
AAGATCCTGG CGCCGGGCAT GCGCCTGGGC TACATCATCG CCCCCGAGCC GATCCACTTC
AAACTCGTGC AGGCCAAGCA GGCATCCGAC CTGCACACGC CCAGCTTCAC GCAGCGCGTG
GCCTACGAAG TGCTGAAGAC CGGCCTGCTC GACACCCACA TCCCGAGCAT CCGCACCCTG
TACGGCAAGC AGTGCGAGAC GATGCTGGAT GCGCTCACGC GCCACATGCC GGCCGGCGTG
CACTGGAACC GTCCGGAAGG CGGCATGTTC ATCTGGGTGG AAGTGCCGGA AGGCATCGAC
ACCATGGCGC TGCTGGAAAA GGCGGTCGCG CGCAACGTGG CCTTCGTGCC GGGCGCGCCG
TTCTACGCCA ACGCACCGCG CCGCAACACC ATGCGCCTGG CCTTCGTGAC GGTGTCGCCG
GAGCGCATCG AACAGGGCAT CACGGTGCTG GGCGAGCTGA TCCGCGCCGA GATCGCCGCG
CTCACGCCCA AGGCCGCGTA A
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| Protein sequence | MGVSTLKDHT MDHPACTFSR RAQQLTSSAI REILKITERP EVISFAGGLP SPVTFPVEAI
QAACARMFAD NPQASLQYTP TEGLSMLREW IAQRHGTTAS RVLITTGSQQ GLDLLGKIFI
DPQSKVLVET PTYLGALQAF SLFEPSYASV PTDERGLLPE ALTPELTAGA RFFYTIPNFQ
NPTGRRLPLE RRQALVARAK ELGVLLVEDD PYGELSYTGD ALPSLRSLNP DGVVYMGSFS
KILAPGMRLG YIIAPEPIHF KLVQAKQASD LHTPSFTQRV AYEVLKTGLL DTHIPSIRTL
YGKQCETMLD ALTRHMPAGV HWNRPEGGMF IWVEVPEGID TMALLEKAVA RNVAFVPGAP
FYANAPRRNT MRLAFVTVSP ERIEQGITVL GELIRAEIAA LTPKAA
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