| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0978 |
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| Symbol | parC |
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| ID | 1219787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1027781 |
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| End bp | 1030126 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237341 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | NP_519099 |
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| Protein GI | 17545697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.913059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.113858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAC AAGACATCCT CTTCGACCCC CGCGAGCCGG CCGAAGCGCT CACGCTCGCG
CACTACGCCG AGCGCGCGTA CCTGGACTAT GCCGTCAGCG TGGTCAAGGG CCGTGCGCTG
CCCGAGGTGG CCGACGGCCA GAAGCCGGTG CAGCGCCGCA TCCTGTTCGC GATGCACGAG
ATGGGCCTGC GCGCCGATGC CAAGCCGGTG AAGTCGGCGC GCGTGGTCGG CGACGTGCTC
GGCAAGTACC ACCCGCACGG CGACCAGTCG GCGTACGACG CGCTGGTGCG CCTGGCGCAG
GACTTCTCGC TGCGCTACCC GCTGATCGAC GGCCAGGGCA ACTTCGGCTC GCGCGACGGC
GACGGCGCGG CGGCCATGCG CTACACCGAA GCGCGCCTGA CGCCGATCTC GCGCCTGCTG
CTCGAGGAAC TCGACCAGGG CACGGTCGAC TTCATCCCCA ACTACGACGG CTCGATGGAT
GAGCCCAGGC TGCTGCCGGC GCGGCTGCCG TTCGTGCTGC TCAACGGCGC ATCGGGCATC
GCCGTGGGCA TGGCGACGGA GATCCCCTCG CACAACCTGC GCGAAGTGGC CACCGCCGCC
GTGGCGCTGA TCCGCGACGA CAAGCTCACC AGCACCGACC TGATGCAGTA CATGCCGGGG
CCGGACTTTC CGGGCGGCGG GCAGATCATC TCGTCGGCGG CGGACATCGC GCAGATCTAC
GAGACCGGGC GCGGCAGCCT GAAGGTGCGC GCGCGCTGGA AGATCGAAGA CCTCGCGCGC
GGCCAGTGGC AACTGGTGGT GACGGAGCTG CCGCCCAACA CCTCGTCGCA GAAGGTGCTG
GAGGAGATCG AGGAGCTGAC CAACCCGAAG GTGCGCGCCG GCAAGAAGTC GCTGACGCCG
GAACAGCTGC AGCTCAAGCA GACCCTGCTC GGCCTGCTCG ACGCGGTGCG CGACGAGTCG
GGCAAGGACG CGCCGGTGCG GTTGGTGTTC GAGCCCAAGA GCAAGAACAT CGGCCAGCAG
GAGTTCGCCA ACGCGCTGCT GGCGCATACG TCGCTGGAAT CGGGCGCGGC CATCAACCTG
GTGATGATCG GCACGGATGG CCGGCCGCGC CAGAAGGGCC TGCGCGAAAT TCTGCGCGAG
TGGATCGACT ACCGGTTCGC CACGGTCACG CGCCGCACGC GCCATCGCCT GGGCAAGGTG
GAGGACCGCA TCCACATCCT CGAAGGGCGG CAACTGGTGC TGCTCAACAT CGACGAGGTG
ATCCGCATCA TCCGCGAGAG CGACGAGCCC AAGCCGGCGC TGATGCAGGC GTTCGGCCTC
TCCGAGCGCC AGGCCGAGGA CATCCTGGAA ATCCGTCTGC GCCAATTGGC GCGGCTGGAG
GCCATCAAGA TCGAGCAGGA GCTGAAGGAC CTGCGCGAGG AGCAGGCCGA GCTGGACGTG
CTGCTGAAGT CCGAGACCAT GATGCGCCGC CGCATCGTCA AGGAGATCGA GACCGACGCC
AAGCAGTTCG GCGACGACCG CCGCACGCTG ATCCAGGAAG AGCGCCGCGC CGCCGCCGAG
GTGAAGGTGG TCGACGAGCC CGTCACCGTG ATCGTCTCGC AGAAGGGCTG GGTGCGCACG
CGCCAGGGCC ATGGCCACGA CGCCACCCAG TTCGGCTTCA AGGCGGGCGA CACGCTGTAC
GACACCTTCG AGTGCCGCAC CACCGACGCG CTGCTGATCT TCGGCACGCG CGACGACAAG
GGCACGGGCC GGGTCTACTC GGTGGCGGTG GCCAACCTGC CGGGCGGCCG CGGCGACGGT
GTGCCGCTGA CCACGCTGAT CGAACTGGCG CCGGGCACGC ACATCGCGCA TACCCTGGCG
AGCCACGCCG AGCAGAACGT GCTGATCTCC ACGCAAGGGG GCAACGGCTT CCTGGCCAAG
GTGGGCGACA TGGTGGGCCG CCAGAAGGGC GGCAAGGCTT TCCTCACGCT CGATGAGGGC
GATCAGCCCA ACAAGCCGGC CGCCGTGCCG GAAGACGCCT ATGGCGCGGC CTGCCTGTCG
GCGAACGGCC GCCTGCTGCT GTTCCCGCTG GCGGAGGTGA AGACGCTGGC CAGCGGCGGC
CGCGGTGTGA TCCTGATGGA GCTGGAGAAG AACGAGACGC TCGCGCAGGC GCTGGCCTTC
GGGCCGGCCG GGTTCGTGGT GTCGGGCGCT GGCCCGCGCA GCGGCAAGGC GACCGAACAG
ACGTTCACGA CGACCCGCGC GCAGGAGCCG TACGCCGGCA AGCGCGCGCG CAAGGGCCGG
GCGATCGAGC CCAAGCTGCG CGACCCGCAG CTGGCGTTGC CCAAGCCCGC ACCCGCCGCG
GCCTGA
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| Protein sequence | MEQQDILFDP REPAEALTLA HYAERAYLDY AVSVVKGRAL PEVADGQKPV QRRILFAMHE
MGLRADAKPV KSARVVGDVL GKYHPHGDQS AYDALVRLAQ DFSLRYPLID GQGNFGSRDG
DGAAAMRYTE ARLTPISRLL LEELDQGTVD FIPNYDGSMD EPRLLPARLP FVLLNGASGI
AVGMATEIPS HNLREVATAA VALIRDDKLT STDLMQYMPG PDFPGGGQII SSAADIAQIY
ETGRGSLKVR ARWKIEDLAR GQWQLVVTEL PPNTSSQKVL EEIEELTNPK VRAGKKSLTP
EQLQLKQTLL GLLDAVRDES GKDAPVRLVF EPKSKNIGQQ EFANALLAHT SLESGAAINL
VMIGTDGRPR QKGLREILRE WIDYRFATVT RRTRHRLGKV EDRIHILEGR QLVLLNIDEV
IRIIRESDEP KPALMQAFGL SERQAEDILE IRLRQLARLE AIKIEQELKD LREEQAELDV
LLKSETMMRR RIVKEIETDA KQFGDDRRTL IQEERRAAAE VKVVDEPVTV IVSQKGWVRT
RQGHGHDATQ FGFKAGDTLY DTFECRTTDA LLIFGTRDDK GTGRVYSVAV ANLPGGRGDG
VPLTTLIELA PGTHIAHTLA SHAEQNVLIS TQGGNGFLAK VGDMVGRQKG GKAFLTLDEG
DQPNKPAAVP EDAYGAACLS ANGRLLLFPL AEVKTLASGG RGVILMELEK NETLAQALAF
GPAGFVVSGA GPRSGKATEQ TFTTTRAQEP YAGKRARKGR AIEPKLRDPQ LALPKPAPAA
A
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