| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0977 |
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| Symbol | |
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| ID | 1219786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1026874 |
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| End bp | 1027731 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237340 |
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| Product | putative transglycosylase signal peptide protein |
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| Protein accession | NP_519098 |
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| Protein GI | 17545696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.121304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.131274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC TCCGACGCGC CGCGCTGCTC TGGATGGCCC TGGCCCTGCT GGCCGGCCAG
CCGGCGCGCG CCGACGTCTA CGGCTACATC GACGAGAACG GCCTGGCGCA CTTCGCGGCC
GAGCGGCTGG ATGACCGCTA TGTGCTGTTC ATGAAGGGCA CGGCGGTGGC CGGTGCGTCC
GGCATTGCCC AGCCGGCCGG TGACCCGCCG GATGCCGATG CCGATCGGAA CGCCGCCGGG
CGCGATGCGC CCGACAACGA CGGCATGCGC CGGCGCCTGG CGCGCGCGGT GCTGCAGCAT
CCCAACGTGC CGAGGGTCGA GCCGCTGATC CGGCAGGCGG CGCGCAAGCA TGGCGTCGAC
CCGGCGCTGG TGAAGGCGGT GATCGCGGCG GAGTCGGGCT TCAATCCGCA GGCGGTGTCG
CCCAAGGGCG CGATCGGGCT GATGCAGGTC ATTCCCGAAA CCGGCGAGCG CTATGGCGTG
ACCGGCGACG CGCGCCGCAC GCTCGCGCAG AAGCTGGCCG ACCCGAGGGT CAACATCGCC
ACCGGTGTGC GCTACCTGAG CGATCTGCTG CGGATGTTCT CCGGCGATCT CGAACTGGCG
CTGGCCGCCT ACAACGCCGG CGAGGGCGCG GTGCAGAAGC ACGGCAACGA CATCCCGCCC
TATGCCGAGA CGCAGAACTA CGTGAAGACG GTGCTGCAGT TCTACCGGTA CTACAACCCC
GTCACCGCCG CGCCGGGCCT GATGACGGTC AGCGCCGGCG GTGCCATGGC GACGACGCGC
AAGCCCGGGC ATTCCGGACA TTCGGGCCGG CCGAGGCGCA TCGAACTGGT GCTGCCGGCC
CCTTCACAAG AACATTGA
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| Protein sequence | MKLLRRAALL WMALALLAGQ PARADVYGYI DENGLAHFAA ERLDDRYVLF MKGTAVAGAS
GIAQPAGDPP DADADRNAAG RDAPDNDGMR RRLARAVLQH PNVPRVEPLI RQAARKHGVD
PALVKAVIAA ESGFNPQAVS PKGAIGLMQV IPETGERYGV TGDARRTLAQ KLADPRVNIA
TGVRYLSDLL RMFSGDLELA LAAYNAGEGA VQKHGNDIPP YAETQNYVKT VLQFYRYYNP
VTAAPGLMTV SAGGAMATTR KPGHSGHSGR PRRIELVLPA PSQEH
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