| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0952 |
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| Symbol | |
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| ID | 1219760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1000548 |
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| End bp | 1002374 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237314 |
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| Product | putative ATP-dependent RNA helicase protein |
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| Protein accession | NP_519073 |
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| Protein GI | 17545671 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.850051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.62904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC CTCAAAACGG CAGCGGCGCG ATTGCGCACG CTGAATCCGA TACCGATACC
CTGATCGCCA ACGCCGCCAC CCAGGCCAGC GCTTTTGCCG CGCTCGGCCT GGACGAACGC
ATCGCCCGCG CGCTCGGCGA ACTGAACTAC ACCCAGCCGA CGCCGGTCCA GGCCCAAGCG
ATTCCCGCCT GCCTGTCGGG CCGCGACCTG CTGGTCACGA GCCAGACCGG CTCGGGCAAG
ACCGCGGCGT TCATGCTGCC GGCCATCCAG CGCATCAGCG AACAGCCCGA GCCGCAGCGC
CCGCGCGCCG ACGGCCCGCA GCAGCGCGTC AAAGGCCGCC GTCCGCGCCC GGCGCCGGCC
AAGCCGTCGC TGCTGGTGCT CACGCCCACG CGCGAACTCG CCCTGCAGGT GACGACCGCC
ACCGCACAAT ACGGCCGCCA CCTGCGCCGC ATCGTCTGCG CGAGCATCCT GGGCGGCATG
CCCTACCCCA AGCAGCTCGA CATGCTGGCG CGCATGCCTG ACATCATCAT CGCCACGCCG
GGCCGCCTGC TCGACCACAT CGACTCCGGC CGCATCGACC TGTCGGCGCT CGACATGCTG
GTCTTCGACG AGGCCGACCG CATGCTCGAC ATGGGCTTCG CCGACGACAT CGAAGCCATC
GTCGGCGCCA CGCCGGCGTC GCGCCAGATG CTGATGTTCT CGGCCACCAT GGACCGCCGC
ATCGAGCAGC TCGCCGAGCG CATGATGCGC GAGCCGCAAC GCATCGAGAT CGCCGCCGCG
CGTATCGACC AAAGCCATAT CGAAGAGCGC CTGCACTTCA CCGACGACCT GTCGCACAAG
CAGCAGTTGC TCGACCACCT GCTGCGCGAT GCGACGCTCA AGCAGGCCAT CGTCTTTACC
GCCACGAAGC GCGATGCCGA CTCGCTGGCC GAGCGCCTGA CCGAGACCGG TTTCTCCGCC
GGCGCCCTGC ACGGCGACAT GCACCAAGGT GCGCGCAATC GTACGCTGAC GGCGCTGCGC
CGCGGCCAAC TGCGCGTGCT GGTGGCCACC GACGTGGCCG CGCGCGGCAT CGACGTGCCG
GACATCACCC ACGTGGTCAA CTTTGACCTG CCCAAGCAGG CTGAAGACTA CGTGCACCGC
ATCGGCCGCA CCGGCCGCGC CGGCCGCAGC GGCATCGCCA TCAACCTGGT GAACCACGGC
GATACGTTCC AATGGCGCCG CATCGAGCGC TTTGTCGACC GCCGCATCGA CGCGACTGTC
GTCGAGGGCC TCGAACCGAA GCGCTCGCCC AAGCCGCGCA GCGGCGGCCC GCGCGCCGGT
GGCGACCGCG GCGGCTACCG TGGCAATGGC GGCGGCAACT GGCGTGGCCA GCGTGACGGC
TACGCCGCGC GCACGGGTAA CGGCGGCAAT GGCGGCAACA GCGAAGGCCG CTTCCAGCGC
AGCTTCGGCG GTGACCGCGA AAGCTTCGCC CCGCGCCGCG ATGACCGTGG CGACCGCGGC
ACCGGCTATC AAGGCGGCCA ACAACGCGAC TGGGGCAACC GTGACAACGC GGCCCCGCGC
CAGTCGTACG GCCAGCAAAC CCGCAACGGC GACCGCTTCG ACCCGCGCCA GCCGCGCAGC
CAGGAAGGCC GCAGCGATTG GCAGCAACGC CCGGCACGCG GCGGTTACGG CAATAGCAAC
GGCAATGGCA GCAGCTACGG CAACCGCGAT GGCGCCCCGC GCCGCTTCGG TGACGACAAC
AGCAACGGCG CGCCCCGCCG CAGCTATGGC AACAGCAATG GCAACAGCTA CGGCAGCAAG
GGCCGCTCGC GCGATTTCGA TCGCTGA
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| Protein sequence | MTQPQNGSGA IAHAESDTDT LIANAATQAS AFAALGLDER IARALGELNY TQPTPVQAQA
IPACLSGRDL LVTSQTGSGK TAAFMLPAIQ RISEQPEPQR PRADGPQQRV KGRRPRPAPA
KPSLLVLTPT RELALQVTTA TAQYGRHLRR IVCASILGGM PYPKQLDMLA RMPDIIIATP
GRLLDHIDSG RIDLSALDML VFDEADRMLD MGFADDIEAI VGATPASRQM LMFSATMDRR
IEQLAERMMR EPQRIEIAAA RIDQSHIEER LHFTDDLSHK QQLLDHLLRD ATLKQAIVFT
ATKRDADSLA ERLTETGFSA GALHGDMHQG ARNRTLTALR RGQLRVLVAT DVAARGIDVP
DITHVVNFDL PKQAEDYVHR IGRTGRAGRS GIAINLVNHG DTFQWRRIER FVDRRIDATV
VEGLEPKRSP KPRSGGPRAG GDRGGYRGNG GGNWRGQRDG YAARTGNGGN GGNSEGRFQR
SFGGDRESFA PRRDDRGDRG TGYQGGQQRD WGNRDNAAPR QSYGQQTRNG DRFDPRQPRS
QEGRSDWQQR PARGGYGNSN GNGSSYGNRD GAPRRFGDDN SNGAPRRSYG NSNGNSYGSK
GRSRDFDR
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