| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0944 |
|---|
| Symbol | |
|---|
| ID | 1219752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 992209 |
|---|
| End bp | 992835 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637237306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519065 |
|---|
| Protein GI | 17545663 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.372489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0275121 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCA TGAGCCGAGC ATCCCGCCAC AACCCTTCGT ATCTGCAACC CGTCGTGCGC
ACCGACATCG GTGACGAGGA CGATCCGGGT ACGCCCAAGA GCAAATCGCA GCGCAAGCGC
GAGGTCACCG CCCTGCAAGA TCTGGGCACC GCACTGGAAG CGCTGCCCAA GGATCGACTC
GCCAAGGTCC CGCTGCCCGA GACGCTGGCC GACGCCCTGC GCGAGGCGCG CCGCATCACC
AGCCACGAAG GCAAGCGCCG CCAGATGCAG TACATCGGCA AGCTGATGCG CGCGCTGACC
GACGATGACA TCGAGGCCAT CCGCCGCGTG CTGGCCACCT TCGTGGGCGC ATCCAAGGCC
GAGACCGCGC GCCTGCACGC CATCGAGCGC TGGCGCGACC GCCTGCTCGC CGACGATGGC
GCCATCACCG AGTTCATCGC CGCGCACCCG GACACCGACG TGCAGGCCCT GCGCACCCTG
GTGCGCAACG CCCGCAAGGA AGCGCAGCTG GGCAAGCCGC CCAAGTCTTC GCGCGAGCTG
TTCCAGGCGG TCAAGCAGGC CTTGGCCGGC CATGATCAGG CCGGCGAAGA CGCCGAACCC
TCCAACCTGG AAGACGACCA GGCATGA
|
|---|
| Protein sequence | MRAMSRASRH NPSYLQPVVR TDIGDEDDPG TPKSKSQRKR EVTALQDLGT ALEALPKDRL
AKVPLPETLA DALREARRIT SHEGKRRQMQ YIGKLMRALT DDDIEAIRRV LATFVGASKA
ETARLHAIER WRDRLLADDG AITEFIAAHP DTDVQALRTL VRNARKEAQL GKPPKSSREL
FQAVKQALAG HDQAGEDAEP SNLEDDQA
|
|---|
| |