Gene RSc0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0942 
Symbolorn 
ID1219750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp990914 
End bp991573 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID637237304 
Productoligoribonuclease 
Protein accessionNP_519063 
Protein GI17545661 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.012478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CTCTTTCCCA GCCGGCTGCG GCATCTTCGA GCGCCACCCA CGTCACCACC 
AAAATCGCCG CCAAGAGCGA CAACAACCTG GTCTGGCTCG ACATGGAGAT GACCGGCCTG
AGCCCCGAGA ACGACCGCAT CATCGAGGTG GCCATGGTCG TCACGGACTC GGAGTTGAAC
GTGCTGGCCG AAGGCCCGGT GCTGGTGATC CACCAGCCGG ACGAGATCCT CGACGGCATG
GATGCCTGGA ACAAGGGCAC GCACGGCCGC TCGGGCCTGA TCGACAAGGT GAAGGCCTCG
ACTACCACCG AAGCGCAGGC CGAAGCCGAT CTGCTGGACT TCCTGAAGAA GTGGGTGCCC
AAGAGCAAGT CGCCGATGTG CGGCAACTCC ATCTGCCAGG ACCGTCGCTT CATGGCGCGC
TACATGCCCA AGCTGGAGGC GTACTTCCAC TACCGCAACC TGGACGTCTC CACGCTCAAG
GAACTTTGCA AACGTTGGCA GCCGGCCATC GCCAAGGGCT TCATCAAGCG CCAGCAGCAC
ACCGCGTACG CCGACATCGT CGAATCGATC GAAGAACTGC GCTACTACCG CCAGCATTTC
ATTCGCGACG TGCCGCAGAC GCCGGAAGCC GAAGCGCTGG CCTCCTCGGT CGCGCCGTAA
 
Protein sequence
MSTPLSQPAA ASSSATHVTT KIAAKSDNNL VWLDMEMTGL SPENDRIIEV AMVVTDSELN 
VLAEGPVLVI HQPDEILDGM DAWNKGTHGR SGLIDKVKAS TTTEAQAEAD LLDFLKKWVP
KSKSPMCGNS ICQDRRFMAR YMPKLEAYFH YRNLDVSTLK ELCKRWQPAI AKGFIKRQQH
TAYADIVESI EELRYYRQHF IRDVPQTPEA EALASSVAP