Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0942 |
Symbol | orn |
ID | 1219750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 990914 |
End bp | 991573 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637237304 |
Product | oligoribonuclease |
Protein accession | NP_519063 |
Protein GI | 17545661 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.012478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCC CTCTTTCCCA GCCGGCTGCG GCATCTTCGA GCGCCACCCA CGTCACCACC AAAATCGCCG CCAAGAGCGA CAACAACCTG GTCTGGCTCG ACATGGAGAT GACCGGCCTG AGCCCCGAGA ACGACCGCAT CATCGAGGTG GCCATGGTCG TCACGGACTC GGAGTTGAAC GTGCTGGCCG AAGGCCCGGT GCTGGTGATC CACCAGCCGG ACGAGATCCT CGACGGCATG GATGCCTGGA ACAAGGGCAC GCACGGCCGC TCGGGCCTGA TCGACAAGGT GAAGGCCTCG ACTACCACCG AAGCGCAGGC CGAAGCCGAT CTGCTGGACT TCCTGAAGAA GTGGGTGCCC AAGAGCAAGT CGCCGATGTG CGGCAACTCC ATCTGCCAGG ACCGTCGCTT CATGGCGCGC TACATGCCCA AGCTGGAGGC GTACTTCCAC TACCGCAACC TGGACGTCTC CACGCTCAAG GAACTTTGCA AACGTTGGCA GCCGGCCATC GCCAAGGGCT TCATCAAGCG CCAGCAGCAC ACCGCGTACG CCGACATCGT CGAATCGATC GAAGAACTGC GCTACTACCG CCAGCATTTC ATTCGCGACG TGCCGCAGAC GCCGGAAGCC GAAGCGCTGG CCTCCTCGGT CGCGCCGTAA
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Protein sequence | MSTPLSQPAA ASSSATHVTT KIAAKSDNNL VWLDMEMTGL SPENDRIIEV AMVVTDSELN VLAEGPVLVI HQPDEILDGM DAWNKGTHGR SGLIDKVKAS TTTEAQAEAD LLDFLKKWVP KSKSPMCGNS ICQDRRFMAR YMPKLEAYFH YRNLDVSTLK ELCKRWQPAI AKGFIKRQQH TAYADIVESI EELRYYRQHF IRDVPQTPEA EALASSVAP
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