Gene RSc0934 details

Gene Information

• Locus tag: RSc0934
• Symbol: rimM
• ID: 1219742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 984633
• End bp: 985187
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637237296
• Product: 16S rRNA-processing protein RimM
• Protein accession: NP_519055
• Protein GI: 17545653
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.0565923
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTCCGG GAGCCGGCGC GAACCCGTCG CTGCCCGACG ATCTGGTCGA GGTGGGCTAC 
GTGGGCGGTG CCTATGGCGT TCGCGGCTGG ATCAAGGTGC AGCCGCACGG CGATGCCGAG 
GCGTTGCTGC ACGCGAGCAC TTGGTGGCTG AAGCCGGCTG CCGGTGCGCC TGCCGTTTCG 
TCCGACTGGC GGGTGCTGCC CGTCGGGACC TCGCGGGAGC ACAGCGGTTC GGTGGTGGCA 
GGGTCGCCCG CCGTGCCGGA TCGCAATGTC GCCGAGGCGC TGCGCGGCTG TACCGTGTGG 
GTCCGCCGTG CCGAGTTTCC CGCGCCGGCC GACGACGAGT TCTACTGGGT CGACCTGATC 
GGCTCGACGG TCGTCAATGA GCAGCAGGAA ACGCTCGGCA CGGTCGCCGG GCTGATCGAC 
AACGGTGCGC ACCAGATCCT GCGCATCGTG GACGAAGGCG GTACCGAGCG GCTCGTGCCG 
TTCGTCGAGG TGTATGTGAA GTCGGTGGAT GTGGCGGGCA AGCACATCGT CGTCGACTGG 
GGCCTGGATT ACTGA 

 

Protein sequence

MRPGAGANPS LPDDLVEVGY VGGAYGVRGW IKVQPHGDAE ALLHASTWWL KPAAGAPAVS 
SDWRVLPVGT SREHSGSVVA GSPAVPDRNV AEALRGCTVW VRRAEFPAPA DDEFYWVDLI 
GSTVVNEQQE TLGTVAGLID NGAHQILRIV DEGGTERLVP FVEVYVKSVD VAGKHIVVDW 
GLDY