Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0928 |
Symbol | |
ID | 1219736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 980326 |
End bp | 981453 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237290 |
Product | hypothetical protein |
Protein accession | NP_519049 |
Protein GI | 17545647 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.125101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGATT CATCCGATCG CCATGTTCCG CGCAAGGGGC GTGGCGCCAC CTCCAATCTG CAAGGCCGCT TCGAGCGCGA CGAACGCACC CGCGTCGATG ACGGTTGGCA GCCGCTCGTC GGGCAGCAGG ATCCGGACGC GCCACCGCGA TTGCAGACCA CCGTCTCCAT CGAGCGGGCG CGCTCGATCC TGAGCCGCAA CCAGTCCCCG GATATCCCGT TCGGCGTGTC GCTCAACCCG TACCGGGGTT GCGAGCACGG CTGCATCTAC TGCTTCGCGC GCCCGACGCA TGCGTATCTG GAACTGTCGC CTGGACTGGA TTTCGAGACC CGGCTGTTCG CCAAGACCAA CGCCGCCGAG CTGCTGCGCG AGACGTTGGC CAAGCCGGGC TACCGCTGCG AGCCGATCGC GCTGGGCGTC AACACCGATG CCTACCAGCC GATCGAGCGC GAACTGTGCG TCACGCGCGA TGTGCTGCAG GTGCTGCACG ATTGCGATCA CCCGGTCGGG TTGATCACCA AGTCGACCTT GATCGAACGC GACATCGACC TGCTCGCGCC GATGGCGGCG AAGCACCTGG CCGTGGCGGC GGTGACCGTC ACCACGCTCG ATGCCGGGCT GGCGCGCAAG CTGGAGCCGC GCGCGGCCAC GCCGTCGAGG CGTTTGCGCA CGATCCGCAC GCTGGCCGAA GCGGGGATTC CGGTCGGCGT CAGCGTCGCG CCGGTCATCC CCTTCATCAC CGACGATCAC ATGGAGCAGA TTCTGGAGGC CGCGCGCGAA GCCGGCGCGA TGTTCGCCAG CTATATCGTG CTGCGTCTGC CGCACGAGCT GGATGCGGTG TTCCAGGACT GGCTGGCGGC GCATTTCCCA GACCGTGCGC AGCGCGTGAT GAACCGCATC CGCGACTTGC ACGGCGGCCA GGACTACAAC CCCGATTTCG GCAACCGCAT GCGCGGCACC GGCATCTGGG CCGACCTGCT GCGCCAGCGT TTCTACAAGG CCGCCGACAG GCTCGGCTTC AGTTACCACC GCTACGACAA GCTGCGGCTG GACACAGCGC AGTTCAAGCC ACCCGCGCGC TCCGTCAAGG CCCGGCCCGT CGACGCGCGG CAGGGCAACC TGTTCTGA
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Protein sequence | MSDSSDRHVP RKGRGATSNL QGRFERDERT RVDDGWQPLV GQQDPDAPPR LQTTVSIERA RSILSRNQSP DIPFGVSLNP YRGCEHGCIY CFARPTHAYL ELSPGLDFET RLFAKTNAAE LLRETLAKPG YRCEPIALGV NTDAYQPIER ELCVTRDVLQ VLHDCDHPVG LITKSTLIER DIDLLAPMAA KHLAVAAVTV TTLDAGLARK LEPRAATPSR RLRTIRTLAE AGIPVGVSVA PVIPFITDDH MEQILEAARE AGAMFASYIV LRLPHELDAV FQDWLAAHFP DRAQRVMNRI RDLHGGQDYN PDFGNRMRGT GIWADLLRQR FYKAADRLGF SYHRYDKLRL DTAQFKPPAR SVKARPVDAR QGNLF
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