Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0922 |
Symbol | |
ID | 1219730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 973512 |
End bp | 974312 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237284 |
Product | signal peptide protein |
Protein accession | NP_519043 |
Protein GI | 17545641 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.928357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCC GTCAACTGCT GCAATGGTCT GCAGGCCTGG GGGCCGCGCT GGCACTGGCC GCCGGGGGCG CGCTGGCGCA GGGCAAGCCG ATCAAGATTG GCGTGACCGC CGGCCCGCAC GCCGAGATCA TGGAAGCGGT GAAGAAGGTC GCCGAACAGG ATGGCCTGAA GCTGCAGATC GTCGAGTTCA ACGACTACAT CCAGCCCAAC GCCGCGCTGG CCGCCGGCGA TCTCGACGCC AACAGCTACC AGCACCAGCC GTACCTCGAC GACCAGATCG CCACGCGCGG CTACAAGTTC GTCAGCGTCG GCCAGACCAT CACCTTCCCG ATGGGCGTCT ACTCGAAGAA GATCAAGTCG CTCAAGGACC TGAAGGACGG CGCACGCTTC GGCCTGCCCA ATGACCCGAC CAACGGCGGC CGCGCGCTCC TGCTGCTGCA GGCGCAGGGC GTGATCAAGC TCAAGCCGAA CGCCGGGTTC AAGGCTTCGC CGCGCGACGT GGCCGAGAAC CCCAGGAAGC TGAAGTTCGT CGAGCTCGAT GCCGCCCAGC TGCCGCGCTC GCTGGATGAC CTGGATGCAG CTGCCGTCAA CGGCAACTAT GCCGAGAAGG CCGGCCTGGA CCCGACCCGG GACGGCATCG CCATCGAAAG CCCGAAGGGT CCGTATGCCA ACGTGATCGC CGTGCGCGCC GCCGACAAGG ACCAGCCCTG GGTCGCCAAG CTGGTCAAGG CGTATCATTC CGACGCGGTC AAGGCGTTCG TGAAGACGAA GTACAAGGAT GCCGTCATTG TGGCCTGGTG A
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Protein sequence | MNRRQLLQWS AGLGAALALA AGGALAQGKP IKIGVTAGPH AEIMEAVKKV AEQDGLKLQI VEFNDYIQPN AALAAGDLDA NSYQHQPYLD DQIATRGYKF VSVGQTITFP MGVYSKKIKS LKDLKDGARF GLPNDPTNGG RALLLLQAQG VIKLKPNAGF KASPRDVAEN PRKLKFVELD AAQLPRSLDD LDAAAVNGNY AEKAGLDPTR DGIAIESPKG PYANVIAVRA ADKDQPWVAK LVKAYHSDAV KAFVKTKYKD AVIVAW
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