Gene RSc0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0920 
SymbolmetN 
ID1219728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp971784 
End bp972836 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content67% 
IMG OID637237282 
ProductDL-methionine transporter ATP-binding subunit 
Protein accessionNP_519041 
Protein GI17545639 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.539621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TCAAGGGGAT ATCGCAGCAC TTTCGGGGAG CGGGCGGCAC CGACGTCCAC 
GCGCTGCGCG ACGTCGACCT GTCCATCGAC AAAGGCGAGA TCTTCGGCAT CATCGGCCGC
AGCGGCGCGG GCAAGAGCAC GCTGGTGCGC GTCATCAACC TGCTGAACCG GCCGACTTCG
GGCACCGTCA CCGTGGCGGG CCAGAGCCTC ACCGCATTGA ATGCCGACGG CCTGCGCCAG
GCGCGCCGCA AGATCGGCAT GATCTTCCAG CACTTCAACC TGCTGTCGTC GCGCACGGTG
TATGACAACG TGGCGCTGCC GCTGGAGCTG GCCGGCACGC CGCGCGAGCG CATCCGCGAG
ATCGTGCTGC CGCTGCTGGA GCTGGTCGGC CTGGACGCGC ACAAGGACCG CTATCCGGCG
CAGATTTCCG GCGGCCAGAA GCAGCGCGTG GGCATCGCCC GGGCGCTGGC GAGCCAGCCG
GACGTGCTGC TGTCGGACGA AGCGACTTCC GCGCTGGATC CGGAGACCAC GCGTTCCATC
CTCGACCTGC TGCGCAAGAT CAACCGCGAG CTGGGCCTGA CCATCGTGCT GATCACGCAC
CAGATGGAAG TCATCAAGCA GGTGTGCGAT CGCGTGGCGG TGCTCGATGC CGGCCGCGTG
GTGGAGCTCG GCCGCGTGAT CGACGTGTTC CTGAAGCCCA GGCATGACGT GACCCGCGCG
CTGATCGGCG AGGTCATTTC GCAGGAGCTG CCGCCGTCCG TGCTGGCGCG CGTGGAAAGC
CGCCTGGTGG CGGCGCGCGA ACGGGGCGGG CGTGACCACC TGTTCCGGCT GGCCTTCACC
GGCGCGGGCG TGGACCAGCC GGTGCTGGCC CAGGCGATCC GCAATTACGG GCTCGATTTC
AACATCCTGC ACGGCCATAT CGACGAGATC CAGGGCCAGG CCTTCGGCTC GCTGGCGATC
CTGGCTTCGG GCGAATCCGC CGACATCGAC AACGCGATGC ACTTCCTGCG CGAGCAAGGC
GTGGTGGTCG AGGAGATCAA CCATGTGGTC TGA
 
Protein sequence
MIELKGISQH FRGAGGTDVH ALRDVDLSID KGEIFGIIGR SGAGKSTLVR VINLLNRPTS 
GTVTVAGQSL TALNADGLRQ ARRKIGMIFQ HFNLLSSRTV YDNVALPLEL AGTPRERIRE
IVLPLLELVG LDAHKDRYPA QISGGQKQRV GIARALASQP DVLLSDEATS ALDPETTRSI
LDLLRKINRE LGLTIVLITH QMEVIKQVCD RVAVLDAGRV VELGRVIDVF LKPRHDVTRA
LIGEVISQEL PPSVLARVES RLVAARERGG RDHLFRLAFT GAGVDQPVLA QAIRNYGLDF
NILHGHIDEI QGQAFGSLAI LASGESADID NAMHFLREQG VVVEEINHVV