Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0910 |
Symbol | ihfB |
ID | 1219718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 962338 |
End bp | 962754 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237272 |
Product | integration host factor subunit beta |
Protein accession | NP_519031 |
Protein GI | 17545629 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGT CCGAACTCGT GGAAAAATTG GCCGCCCGCT TTCCGCAGCT GCTGCTGCGG GATGCGGACA TCGCGGTCAA GACGATCCTG GATGCGATGT CCGACGCCTT GGCGGACGGC CATCGCATCG AGATTCGCGG GTTCGGCAGC TTTGGCCTGA ATCGGCGTCC ACCGCGCGTC GGGCGCAACC CCAAGTCCGG CGAGAAGGTG CTGGTGCCCG AAAAACGGGT GCCGCACTTC AAGGCGGGCA AGGAGCTGCG CGAACGGGTC GACCGCAGCC TCGAGCGGCA GGGCGATTCC TCTTCGGAGG GCGAGCCCGT GTCGCTGACG GCTGTGAAGG CGGCGCGGCA GGCCGGCGGT CACCATGCCG CCGGTTTCCC GGCGGAAGCG ACGCCGACGC TGGTCATGTC GCGCTGA
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Protein sequence | MTKSELVEKL AARFPQLLLR DADIAVKTIL DAMSDALADG HRIEIRGFGS FGLNRRPPRV GRNPKSGEKV LVPEKRVPHF KAGKELRERV DRSLERQGDS SSEGEPVSLT AVKAARQAGG HHAAGFPAEA TPTLVMSR
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