| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0909 |
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| Symbol | rpsA |
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| ID | 1219717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 960607 |
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| End bp | 962295 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637237271 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | NP_519030 |
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| Protein GI | 17545628 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAA CTAACGAATC TTTTGCCGCC CTGTTCGAAG AGTCGATCGC CCGTTCCAAT
ATGAAGGCGG GTGAAGTGAT CTCTGCGGAA GTTGTGCGTA TCGACCACAA CTTCGTCGTT
GTGAACGCGG GCCTGAAGTC CGAAGCTTTT GTTCCGGTCG AAGAATTCCT GAACGATCAG
GGCGAGCTGG AAGTGCAAGT CGGCGACTAC GTTTCGGTCG CGATCGACGC ACTGGAAAAC
GGCTACGGCG ACACCATCCT GTCGCGCGAC AAGGCCAAGC GCCTGGCTTC GTGGCTGAAC
CTTGAGAAGG CACTGGAATC CGGCGAGATC ATCTCCGGTA CCGTGACCGG CAAGGTGAAG
GGCGGCCTGA CCGTCATGGT CAACGGTATT CGTGCATTCC TGCCGGGTTC GCTCGTCGAC
GTGCGTCCGA TCAAGGACAC CACGCCGTAC GAAGGCAAGA CCCTCGAATT CAAGGTCATC
AAGCTGGACC GCAAGCGCAA CAACGTTGTG CTGTCGCGCC GCGCCGTGGT GGAAGCCACG
CTGGGCGAAG AGCGCCAGAA GCTGATGGAA ACGCTGAAGG AAGGCGCGAT CGTCAACGGT
ATCGTCAAGA ACATCACCGA CTACGGCGCG TTCGTGGATC TGGGTGGCAT CGACGGTCTG
CTGCACATCA CCGACCTGGC ATGGCGTCGC GTGCGTCATC CGAGCGAAGT GCTGTCGGTT
GGCCAGGAAA TCACCGCCAA GATCCTCAAG TTCGACCAAG AGAAGAACCG CGTCTCGCTG
GGCGTCAAGC AACTGGGCGA AGATCCGTGG GTCGGTATCT CGCGTCGCTA CCCGCAAGGC
ACCCGCCTGT TCGGCAAGGT GACCAACCTG ACCGACTACG GCGCGTTCGT CGAGATCGAA
GCCGGCATCG AAGGCCTGGT GCACGTGTCG GAAATGGACT GGACCAACAA GAACGTGGCC
CCGTCCAAGG TTGTCCAGCT GGGCGACGAA GTGGAAGTCA TGGTCCTGGA CATCGACGAA
GACAAGCGTC GTATCAGCCT GGGCATGAAG CAGTGCAAGG CGAACCCGTG GGACGACTTC
GCTCGCAACC ACAAGAAGGG CGACAAGCTG GCCGGCCAGA TCAAGTCGAT CACCGACTTC
GGCGTGTTCA TCGGCCTGCC GGGCGGCATC GACGGCCTGG TGCACCTGTC CGACCTGTCG
TGGCAAGAAA CCGGCGAAGA AGCCGTTCGC AAGTACAAGA AGGGCGACGA AGTGGAAGCC
GTGGTGCTGG CCATCGACGT CGAGAAGGAA CGCATCTCGC TGGGCATCAA GCAGCTGTCG
GGCGATCCGT TCAACAACTT CATCTCGGCC AACGACAAGG GTTCGATCGT GTCCGTCACG
ATCAAGACCG TTGATCCGAA GGGCGCCGTG GTGCAGTTGG CTGACGACGT GGAAGGCTAC
CTGCGTGCCT CGGAAATCTC GAGCGACCGC GTGGAAGATG CCCGCAACGT GCTGAAGGAA
GGCGAAACGA TGACCGCGAT GATCGTCAAC ATCGATCGCA AGTCGCGCAA CATCAACGTT
TCGATCAAGG CCAAGGACAG CGCCGACCAG CAGGAAGCCA TGCAGAAGTT CGCGCAGGAC
ACCGGTACCG CCGGTACCAC GAACCTGGGC GCGCTGCTGA AGGCCAAGCT GAACGAAACC
AATCAGTAA
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| Protein sequence | MSQTNESFAA LFEESIARSN MKAGEVISAE VVRIDHNFVV VNAGLKSEAF VPVEEFLNDQ
GELEVQVGDY VSVAIDALEN GYGDTILSRD KAKRLASWLN LEKALESGEI ISGTVTGKVK
GGLTVMVNGI RAFLPGSLVD VRPIKDTTPY EGKTLEFKVI KLDRKRNNVV LSRRAVVEAT
LGEERQKLME TLKEGAIVNG IVKNITDYGA FVDLGGIDGL LHITDLAWRR VRHPSEVLSV
GQEITAKILK FDQEKNRVSL GVKQLGEDPW VGISRRYPQG TRLFGKVTNL TDYGAFVEIE
AGIEGLVHVS EMDWTNKNVA PSKVVQLGDE VEVMVLDIDE DKRRISLGMK QCKANPWDDF
ARNHKKGDKL AGQIKSITDF GVFIGLPGGI DGLVHLSDLS WQETGEEAVR KYKKGDEVEA
VVLAIDVEKE RISLGIKQLS GDPFNNFISA NDKGSIVSVT IKTVDPKGAV VQLADDVEGY
LRASEISSDR VEDARNVLKE GETMTAMIVN IDRKSRNINV SIKAKDSADQ QEAMQKFAQD
TGTAGTTNLG ALLKAKLNET NQ
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