Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0907 |
Symbol | aroA |
ID | 1219715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 958441 |
End bp | 959751 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237269 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | NP_519028 |
Protein GI | 17545626 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACC TCGACGTCGG TCCGCTGAAG GCGGCGCGCG GCACGGTCAA GCTGCCGGGC TCGAAGAGCA TCTCCAACCG CGTGCTGCTG CTGGCCGCCC TCGCCGAGGG CGAGACCGTC GTGCGCGACC TGCTCGATTC CGACGACACC CGCGTGATGC TGGCCGCGCT CGACACGCTC GGCGTGCGAT GCGAGCCCCT CGGCACCGCC AACGCCTATC GCGTGACCGG CACGGGCGGT CGTTTCCCGG CCAAGTCCGC CGATCTGTTC ATGGGCAACG CCGGCACCGC CATCCGCCCG CTGACGGCGG CCCTGGCGCT GCAGGGCGGC GAGTACACGC TGCACGGCGT GCCGCGCATG CACGAGCGGC CGATCGGCGA TCTGGTCGAC GGCCTGCGGC AAGTCGGCGC GCGCATCGAC TACACCGGCA ATGAAGGTTT CCCGCCGCTG GCGATCCGCG CGGCCTCCAT CCGGATCGAC GCGCCGATCC GCGTGCGCGG CGATGTGTCG AGCCAGTTCC TGACCGCGCT ACTGATGGCG CTGCCGCTGG TGGAGGGGAG CGGTCGGCCG GTGACCATCG AGGTGGTCGG CGAGCTGATC TCGAAGCCGT ACATCGAAAT CACGCTCAAC CTGATGGCGC GCTTCGGAGT ACAGGTCGAG CGCAACGGCT GGGCGTCGTT CAGCGTGCCG ACCGGCGTGG CTTACCGTGC GCCGGGCGAG ATCTTTGTCG AGGGCGACGC GTCGTCCGCG TCGTACTTCC TGGCGGCGGG CGCGCTCGGC GGCGGGCCGG TGCGCGTGGA AGGGGTCGGC ATGTCGAGCA TCCAGGGCGA CGTGCGCTTT GCCGATGCGC TCAATCGCAT GGGCGCCAAC GTCATGGCCG GCGACAACTG GATCGAAGTG CGGGGCGTGG AGCGCGACGA CGGCAAGCTG CATGCGCTGG AGCTCGACTG CAATCACATC CCCGATGCCG CCATGACGCT GGCGGTGGCC GCGCTGTTCG CCGATGGCAC CACCACGCTG ACCAACATCG GCAGTTGGCG CGTCAAGGAG ACCGACCGGC TGACCGCGAT GGCCACCGAG CTGCGCAAGC TTGGCGCCGC GGTGGAAGAG GGCACCGACT ACATCCGCGT GACCCCGCCG TCGCACTGGA CCGCGCCTGC CGGCGGGATC GACACCTACG ACGATCACCG CATGGCGATG GCCTTTTCGC TGGCGGCCTT CGGCCCGGTG CCGGTACGCA TCAATGACCC GCGCTGCGTG GCCAAGACGT TCCCCGAATA CTTCACGGCG TTCGGCGGAA TCGCCGCCTG A
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Protein sequence | MEHLDVGPLK AARGTVKLPG SKSISNRVLL LAALAEGETV VRDLLDSDDT RVMLAALDTL GVRCEPLGTA NAYRVTGTGG RFPAKSADLF MGNAGTAIRP LTAALALQGG EYTLHGVPRM HERPIGDLVD GLRQVGARID YTGNEGFPPL AIRAASIRID APIRVRGDVS SQFLTALLMA LPLVEGSGRP VTIEVVGELI SKPYIEITLN LMARFGVQVE RNGWASFSVP TGVAYRAPGE IFVEGDASSA SYFLAAGALG GGPVRVEGVG MSSIQGDVRF ADALNRMGAN VMAGDNWIEV RGVERDDGKL HALELDCNHI PDAAMTLAVA ALFADGTTTL TNIGSWRVKE TDRLTAMATE LRKLGAAVEE GTDYIRVTPP SHWTAPAGGI DTYDDHRMAM AFSLAAFGPV PVRINDPRCV AKTFPEYFTA FGGIAA
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