Gene RSc0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0907 
SymbolaroA 
ID1219715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp958441 
End bp959751 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content70% 
IMG OID637237269 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionNP_519028 
Protein GI17545626 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACC TCGACGTCGG TCCGCTGAAG GCGGCGCGCG GCACGGTCAA GCTGCCGGGC 
TCGAAGAGCA TCTCCAACCG CGTGCTGCTG CTGGCCGCCC TCGCCGAGGG CGAGACCGTC
GTGCGCGACC TGCTCGATTC CGACGACACC CGCGTGATGC TGGCCGCGCT CGACACGCTC
GGCGTGCGAT GCGAGCCCCT CGGCACCGCC AACGCCTATC GCGTGACCGG CACGGGCGGT
CGTTTCCCGG CCAAGTCCGC CGATCTGTTC ATGGGCAACG CCGGCACCGC CATCCGCCCG
CTGACGGCGG CCCTGGCGCT GCAGGGCGGC GAGTACACGC TGCACGGCGT GCCGCGCATG
CACGAGCGGC CGATCGGCGA TCTGGTCGAC GGCCTGCGGC AAGTCGGCGC GCGCATCGAC
TACACCGGCA ATGAAGGTTT CCCGCCGCTG GCGATCCGCG CGGCCTCCAT CCGGATCGAC
GCGCCGATCC GCGTGCGCGG CGATGTGTCG AGCCAGTTCC TGACCGCGCT ACTGATGGCG
CTGCCGCTGG TGGAGGGGAG CGGTCGGCCG GTGACCATCG AGGTGGTCGG CGAGCTGATC
TCGAAGCCGT ACATCGAAAT CACGCTCAAC CTGATGGCGC GCTTCGGAGT ACAGGTCGAG
CGCAACGGCT GGGCGTCGTT CAGCGTGCCG ACCGGCGTGG CTTACCGTGC GCCGGGCGAG
ATCTTTGTCG AGGGCGACGC GTCGTCCGCG TCGTACTTCC TGGCGGCGGG CGCGCTCGGC
GGCGGGCCGG TGCGCGTGGA AGGGGTCGGC ATGTCGAGCA TCCAGGGCGA CGTGCGCTTT
GCCGATGCGC TCAATCGCAT GGGCGCCAAC GTCATGGCCG GCGACAACTG GATCGAAGTG
CGGGGCGTGG AGCGCGACGA CGGCAAGCTG CATGCGCTGG AGCTCGACTG CAATCACATC
CCCGATGCCG CCATGACGCT GGCGGTGGCC GCGCTGTTCG CCGATGGCAC CACCACGCTG
ACCAACATCG GCAGTTGGCG CGTCAAGGAG ACCGACCGGC TGACCGCGAT GGCCACCGAG
CTGCGCAAGC TTGGCGCCGC GGTGGAAGAG GGCACCGACT ACATCCGCGT GACCCCGCCG
TCGCACTGGA CCGCGCCTGC CGGCGGGATC GACACCTACG ACGATCACCG CATGGCGATG
GCCTTTTCGC TGGCGGCCTT CGGCCCGGTG CCGGTACGCA TCAATGACCC GCGCTGCGTG
GCCAAGACGT TCCCCGAATA CTTCACGGCG TTCGGCGGAA TCGCCGCCTG A
 
Protein sequence
MEHLDVGPLK AARGTVKLPG SKSISNRVLL LAALAEGETV VRDLLDSDDT RVMLAALDTL 
GVRCEPLGTA NAYRVTGTGG RFPAKSADLF MGNAGTAIRP LTAALALQGG EYTLHGVPRM
HERPIGDLVD GLRQVGARID YTGNEGFPPL AIRAASIRID APIRVRGDVS SQFLTALLMA
LPLVEGSGRP VTIEVVGELI SKPYIEITLN LMARFGVQVE RNGWASFSVP TGVAYRAPGE
IFVEGDASSA SYFLAAGALG GGPVRVEGVG MSSIQGDVRF ADALNRMGAN VMAGDNWIEV
RGVERDDGKL HALELDCNHI PDAAMTLAVA ALFADGTTTL TNIGSWRVKE TDRLTAMATE
LRKLGAAVEE GTDYIRVTPP SHWTAPAGGI DTYDDHRMAM AFSLAAFGPV PVRINDPRCV
AKTFPEYFTA FGGIAA