| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0897 |
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| Symbol | |
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| ID | 1219705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 947154 |
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| End bp | 947843 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237259 |
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| Product | hydrolase protein |
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| Protein accession | NP_519018 |
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| Protein GI | 17545616 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00554563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.72661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CGAGGTTTCC CGATCCGCTG GGCGCGGTGC TGTTCGACCT GGACGGCACG
CTGGCCGATA CGGCGCCGGA CCTGGCCGCA GCGGCCAACA AGGTCCGCGT GGATCGCGGC
CTGGAACCGC TGGCCTACGA AGCGCTGCGG CCCATGGCGT CGCATGGCGC CCGCGGCCTG
ATCGGCGTGG CATTCGGCAT CGGGCCGGAA GATGCGGAAT TCGAATCGCT CAAACACGCC
TTCCTGGCCA ACTACGAGGC CGACATCTGC GTCCACACGC GGCTGTTTCC CGGCATGGAC
GACGTCCTGG CCGAGCTGGG CCGCGCGGGC GTGCCATGGG GCATCGTGAC CAACAAGCAT
GCGCGGTTCA CCGTGCCGCT GGTGGCACAG CTGGCGTTCC CGGTGCCGCC CGCCTGCGTG
GTCAGCGGCG ACACGACTCC GCACAGCAAG CCTCACCCCG CCCCGCTGCT GCATGCGGCC
GGCGCGATCG GCGTGCCGTC GCAGCAGGTC GTCTATGTTG GCGACGACGT ACGTGATATC
GAAGCGGGCC GTGCCGCCGG CATGCCTACC ATTGCCGCCA GTTACGGCTA TTGTGGTAAT
GGGCCGCCCC CCGCGGAGTG GCAAGCCGAT GCGCTGATCG TGCACGCGAC CGAATTGATT
CCGCTGCTGT TCGCATCGCA GCGCGCCTGA
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| Protein sequence | MTTTRFPDPL GAVLFDLDGT LADTAPDLAA AANKVRVDRG LEPLAYEALR PMASHGARGL
IGVAFGIGPE DAEFESLKHA FLANYEADIC VHTRLFPGMD DVLAELGRAG VPWGIVTNKH
ARFTVPLVAQ LAFPVPPACV VSGDTTPHSK PHPAPLLHAA GAIGVPSQQV VYVGDDVRDI
EAGRAAGMPT IAASYGYCGN GPPPAEWQAD ALIVHATELI PLLFASQRA
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