| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0896 |
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| Symbol | |
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| ID | 1219704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 943260 |
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| End bp | 947045 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237258 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_519017 |
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| Protein GI | 17545615 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0198015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.329843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCT CCCCCGATTC GCACTCCGAC CTGCAACCCA ACGCCACCGG CTGGCGGGCA
CGGCTCGGCC GCTGGCGGAG CAGCCCGGGC TGGCAGCGCG CGGCCCGACT CGGCGAGCAG
GTACGGGCAT CGCGGCGCAC CAGGCGCATC GGACTGGGCG TGCTGATCTT CCTGGCCGTG
TTCGGCCTGC TCGGTGCGGT GGGCGGCCCG CCGCTGCTGC ATCACCTGGC TGAGACGCAG
TTGAGCAAGT ATCTGGAACG GCCCGTGACG GTCGGCAAGA TCCGCCTCAA CCCGTACACG
CTGCGGCTCG AGATCGACCA GCTGCACATC GCCGAGCGCG ACGGCAAGAC ACCGTTCATC
GACATCGGCC ATCTGCATGT CAACGCGGCA TGGAGTTCGG TCTTCCGCCG CGCCCCCGTC
ATCGAAGAAC TGAAGGTGGA TGCCCCGCGC GTGCGCATCG TGCGGACAGC CGAGCAACGC
TTCAACTTCT CCGACATCGT CGACAAGCTG ACCCAGCCGG AGGTGCCGCC CAAACCCAAG
TCGAACGAGC CGGCGCGCTT CGTCTTCGCC AACCTGCAAC TGAACAACGG CGCCATCCAG
TTCGTCGATC AGCCGCTCGG GGCGCAGCAC ACCGTGGACG GGCTGCAGAT TGGCGTGCCC
TTCCTGGCGA GCCTGCCAGC CGACGTCGAC ATCTTTGTGC AGCCGCTGCT GGCCGCGCGG
ATCGACGGCG CGCCACTGCA TTTCGCCGGC AAGACGAAAC CGTTTGCGCA GTCGCTCGAA
TCCAGCTTGA ACATCAAGCT CGACGGCCTG GAACTGCCCC GCTACCTCGG CTACGTGCCG
GGCCCCCTGC CGGTGGCCGT ACCGCAGGGC AAGCTGACCA CCGACCTGAC GATCGACTTC
CAGAAACCCC GCACCGGCAA CCCCGTGCTG CGTGTGCACG GCACGGCCGG CCTCGATGGC
CTGGAAGTGA CCGATACCAA GAAGGCGCCC CTGGTGGCGG CCAAGCAACT GCGTGCGACC
CTGTCCGATG TCCGCCCGCT CGACAACGTG TATCACCTGG ATATGCTGTC GCTGGACGGC
GTGCGCGTGG ATGCCGTGCG CGCGCCGGAC GGCTCGATCA ATTTTGCGCA ACTGGGCGGC
AAGCCCGCCC CGGAAGCCAA GCCGGCAGCC CCCGCTCCCG CCGCCCAGCC CAAGCCGCTC
GACGTGGCGG TCGGCAAGCT GCAGCTGGCA AACAGCAGCG TCCACTGGCG CGATGCCACC
ACGCAGCCCG CAGCCGATCT CGTGCTGGAC GACCTCCACG GCGACGCGGC CGTGCGCACC
CTTGGCGGCC CGACCACGCT CGACGTAGGC GCGAAGCTGG CCAGCGGCGG CACGCTCAAC
GTCAAGGGCA GCACTTCGCT GGAAAAACGC ACCGGCGAGC TGGAGCTGAA GCTGGAGGCC
CTCAAGCTCG CGGGCATCGG GCCTTACCTG CGCCAGGCCG GCGCGCCCCA GTTGCAGAAC
GGCGCACTGT CGGCAGACGG CAAGATCGCG CTGGAGTTCG GTGCCGACAA GTTCAACGTG
CACGCGGAAC CGCTGGTCGC CACGCTGGCC GATCTGGCGC TGGCGCCGGC CACCCGCAAC
GACACCGCGC TGCGCGCCAA GCAATTGCGT GCCGACATCA AAAGCTTCGA TCTGGCAGCG
CGCACGCTGG CATTGAACGA GGTGCGCGCC GACGGTTTGC AGCTCGACGT GCTGCGCAAG
CAGGACGGCA GCACCGTGCT GACCCTGCTC GATACCGCTC AGCAAGCCGC CGCCAAGGCG
AAGGCCGCGC CCACCACGTC AGGCGCGCCG GCCGAGAAGC CATGGGCCGT GACCGTCCAG
GCGCTGCGCC TGGACAACGG CGCGATCGGC TTTGAAGACC AGACCAACTC GCGACCGGTG
AAGGTGCGCG TCGAACCGCT GAACGTGCTG GTGCAGAACG CCTCGACCGA TCTCGGCAAG
CCGGTCGATG TGCAGATCGG CGCGGGACTG GGCAGCAAGG GCAAGCTCGA CGTGCGCGGC
AACGTGGTGC CGCAACCGCT CAAGGCGGAG CTGCGCGTGA ATGCGCAGAA CCTGTCGCTG
GCGGGCTTCG ACCCGTATCT GGACAAATCG CTCAACGCGG CGATCACCAG CGCATTGCTG
ACGATGGACG GCCACCTCGC GCTCAACCAG GGCAAGGCGC TGACCGTGAA CTACCAGGGC
AATGCCACGC TCGGCAACGT GCGCCTGCAG GACCGCGTGA GCTCCGACGA CTTCCTGCGC
TGGCGCTCGC TCGCGCTCAA CCGCATCCAG GTCAGCTACG ACGGTGCCAC GCCGCGCGTG
CGCGTGGGGG CGCTGGCGCT ATCAACCTTC TATGCGCGGA TCATCATCAA CCCGAACGGC
CGCTTGAACC TGCAGGACAT CCGCGTGCAG CCGACCGAGG AACACCGCTC GCTCACGCAG
GCGACACCCG GCCCGGCCTC ATCCCCTGCG GCAACATCCG GCAACGCTGT CGCAGCCGCA
TCGGTGCCGG CGGCAAACCC GGCTTCGGCC GTGACCGCAG GCATGCCCGC TTCGGCCATG
GCGGCCGCAC CCAAGGCCGG CGGCGCGGAC CTGAGAATCG ACGCGATCAC GCTGCAGGAC
GGCAACATCC GCTTCACCGA CAACTTCATC AAGCCGAACT ACACCGCCAA CCTGACCACC
ATCGGCGGCT CGGTCGGCAC CATCAGCACG TCGGCCGGCC AGCAGCCCGC CGACGTGACC
CTGCGCGGCA GCGTGGACGG CACCGCGCCG GTCGACATCC ACGGCAAGGT CAACCCGCTC
GCGCCCACCG CGTTCGTCGA CCTCTCCGCC AAGGCCAACG ACATCGAGCT GACCAACCTG
ACACCCTACT CCGCAAAATA CGCCGGCTAC CCGATCACCA AAGGCAAGCT GACGATGGAC
CTGCACTACC TGCTCGACCA GGGCAAGCTG AGCGCGGACA ACCACATCTT CATCGACCAG
CTGACCTTCG GCGAGCGCGT GGAGAGCAAG GATGCGACCA ACCTGCCGGT GCGGCTGGCG
GTGGCGCTGC TGAAGAATTC GCGCGGCGAA ATCGACGTGC GCGTGCCGGT GTCGGGCTCG
CTGGACGACC CGCAGTTCAG CCTGGGGGGC GTGATCGTGC GCGCCTTCGT CAACCTGATC
GTGCGGGCCG TGACCGCGCC CTTCTCGCTG CTGGCAAACG CCTTCGGCGG CAGCGGCGGC
GAAGAGCTCG GCTACATCGA ATTCGACCCG GGCACGGCCG TCCTCTCGCA GGCATCGATG
GCCAAGATCG ACAAGCTGGC AACGGCGCTG AAGGACCGCC CGGCGCTGAA GCTGGACATC
ATCGGCCGCG TCGATCCGGC CGTCGACCGC GACGGCCTGC GCCGCGAAAC CGTCAACCGC
CAGATCCGCG AACAGAAACT CAAGGACGCC GGTGATGCCA CCGAAGCCGA CAGCACGGTC
AAGCCCGATG AGATGGACAA GTATCTTGAG CGCGCCTACA AGGCCGCCAA ATTCCCCAAG
CCGCGCAATG TGATCGGCCT GGCGAAATCG CTGCCGCCGG ACGAGATGCG CAAGCTGATG
GAGACCAACG TGCAGGTGAC CGACTCGGAC CTGCGCGAGC TGGCCCAGCG CCGCGCCAAC
GCGGTGCACG TGGCGCTGGC CGAACGCGTG GAACCCGCGC GCCTCTTCGT GGTAGCGCCC
AAGCTCGACC CCGAGGGCAT CAAGGACAAG GGCAAGACCT CGCGGGTTGA TTTCTCGCTC
AAGTAG
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| Protein sequence | MTTSPDSHSD LQPNATGWRA RLGRWRSSPG WQRAARLGEQ VRASRRTRRI GLGVLIFLAV
FGLLGAVGGP PLLHHLAETQ LSKYLERPVT VGKIRLNPYT LRLEIDQLHI AERDGKTPFI
DIGHLHVNAA WSSVFRRAPV IEELKVDAPR VRIVRTAEQR FNFSDIVDKL TQPEVPPKPK
SNEPARFVFA NLQLNNGAIQ FVDQPLGAQH TVDGLQIGVP FLASLPADVD IFVQPLLAAR
IDGAPLHFAG KTKPFAQSLE SSLNIKLDGL ELPRYLGYVP GPLPVAVPQG KLTTDLTIDF
QKPRTGNPVL RVHGTAGLDG LEVTDTKKAP LVAAKQLRAT LSDVRPLDNV YHLDMLSLDG
VRVDAVRAPD GSINFAQLGG KPAPEAKPAA PAPAAQPKPL DVAVGKLQLA NSSVHWRDAT
TQPAADLVLD DLHGDAAVRT LGGPTTLDVG AKLASGGTLN VKGSTSLEKR TGELELKLEA
LKLAGIGPYL RQAGAPQLQN GALSADGKIA LEFGADKFNV HAEPLVATLA DLALAPATRN
DTALRAKQLR ADIKSFDLAA RTLALNEVRA DGLQLDVLRK QDGSTVLTLL DTAQQAAAKA
KAAPTTSGAP AEKPWAVTVQ ALRLDNGAIG FEDQTNSRPV KVRVEPLNVL VQNASTDLGK
PVDVQIGAGL GSKGKLDVRG NVVPQPLKAE LRVNAQNLSL AGFDPYLDKS LNAAITSALL
TMDGHLALNQ GKALTVNYQG NATLGNVRLQ DRVSSDDFLR WRSLALNRIQ VSYDGATPRV
RVGALALSTF YARIIINPNG RLNLQDIRVQ PTEEHRSLTQ ATPGPASSPA ATSGNAVAAA
SVPAANPASA VTAGMPASAM AAAPKAGGAD LRIDAITLQD GNIRFTDNFI KPNYTANLTT
IGGSVGTIST SAGQQPADVT LRGSVDGTAP VDIHGKVNPL APTAFVDLSA KANDIELTNL
TPYSAKYAGY PITKGKLTMD LHYLLDQGKL SADNHIFIDQ LTFGERVESK DATNLPVRLA
VALLKNSRGE IDVRVPVSGS LDDPQFSLGG VIVRAFVNLI VRAVTAPFSL LANAFGGSGG
EELGYIEFDP GTAVLSQASM AKIDKLATAL KDRPALKLDI IGRVDPAVDR DGLRRETVNR
QIREQKLKDA GDATEADSTV KPDEMDKYLE RAYKAAKFPK PRNVIGLAKS LPPDEMRKLM
ETNVQVTDSD LRELAQRRAN AVHVALAERV EPARLFVVAP KLDPEGIKDK GKTSRVDFSL
K
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